Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2771 ATGGATACAAGATCTGTTTCACCACGGCGAAATGAAACCGATCGTTTGTGCTTGCTCAAATTCAAGGAATCAATATCCAATGATCCATATCATGTCTTGGATTCTTGGAATGCTTCCACACACTTTTGCAACTGGCATGGAATCACTTGTGGCCACAAGCATCAGAGAGTTGCAACGTTTGAGCTAGAAGGATATCAATTGCATGGCTCTATTTCACCTTCCATTGGCAATCTCTCCTTTCTGAGAATTATCAAACTCGGAAACAACAGTTTCCACGGGCAAATCCCACAAGAGCTGGGTCGCTTGTTTCGGCTACAGGTACTTGATCTCACCCGTAATACATTGACTGGGGAATTTCCTGTCAACGTGACAAGTTGTTCTGACCTCAAATATTTATCATTTGGTCGGAATAATCTTACTGGCAAAATACCTGTGGAGATTAGCTCTTTGCATAAGCTTGAAGAATTATATTTGCATAATAACAATTTGAATGGACAGATCCCAGTTTCTATGTACAATCTTTCTTCACTTGCTTTTCTTTTTATGATGAATAATAACTTGGAGGGAAGCATACCTGAAGAAATAGGCCATATGAAAAGCTTGGAAACTTTTCAAGTACATAGCAATAAGCTTTCCGGCGCATTTCCTTCCTCACTTTACAATTTGTCATCTCTTGTTGAAATTGCAGTTTCGAATAATCAATTTCATTGCTCTCTTCCGGCAAGCATGTTCAACACCCTCCCTTCTTTCAAATACTTGATCTTAGGATTAAATCAATTCTATGGTCCTATTCCAACTTCCATTGTAAATGCATCCAAACTTCAAATAATTTCAATCCCTGACAATGATTTTACTGGGTCAGTTCCCAATCTTGGAAAGTTGCTTGACCTTTGGAGTCTGGGCTTGGCTGGTAATAATCTGGGAAGTAATTCTGCTAAAGACTTGGAGTTCTTAGAATCATTGGTCAATTGCAGTAAGTTGGAAGAACTAGATATGCAAGATAATAATTTTGGGGGCCATTTACCAAATACCATAGGAAATTTGTCCACCCAACTCAGAATACTCTCTCTTGGAATTAATCAAATATCTGGGAAAATTCCTGCATCATTAGGAAACCTCATTGACTTGAGTGTATTGGCAACGAATCATAATCATCTCACTGGCAACATTCCATTTACTTTTGGGAAGTTTCAAAAGATGCAATTTTTAAGTTTGTCGGGAAACAAATTGTCTGGAGAAATTGTTCCTTTTATAGGCAATTTTACTCAATTATTTCATTTAACTTTGTCAGACAACATTTTAGAAGGACAAATTCCACCAACCATTGGAAATTGCAAAAAATTACAGTTGCTTGACTTGTCACTAAACAAGTTCAGTAGAGCTATACCAGAAGAAATCTTTGGTCTTTCATCTTTATCAATATTACTAAACTTATCCCATAACTCATTGAGTGGTAACATCTCTAGTGATGTGGGAAAGTTAACAAATATTGGTAATTTAGATTTCTCTTGTAATAATTTGTCTGGAAATATTCCGGAAACCATTGGAGATTGCGCAAGCTTGGAGTACATCCTTTTACAAGGGAATTTCTTTCAAGAAACTATTCCTTCATCTTTGGCTTCATTAAAAGGTCTACGGTATTTGGACTTCTCAAGAAATAACTTATCTGGGTCAATTCCAAAAGATTTGCAAGGTCTTTCTGATTTAGAGTACTTAAATGTTTCTTTCAATATGTTGGATGGTGAAGTGCCGAAGAAAGGTGTCTTTAGCAATGCAAGTGCAATATCATTGATCGGGAATAGTGAGCTTTGTGGTGGCATATCAGAGCTAAAACTGCCACCATGCCGTGTAAATGATGAGGTGGAAAGAAAGCACCTCAACTTTAGGTTGGTTGTAATATTGTGTTGTGTTGTGGCTTTTTCTCTTATTCTGTCATCCATTGTTGTTATTCATTATAAGAAGAAAAGAAGCAAGAAATCTTCTTTGAGTTCACATACAGTTGGCCTACTTCCCAAAGTATCGTACCAAAGCTTACACAACGCCACGGATGGGTTCTCCACCAGCAACTTGATAGGATCTGGGAGATTTGGCTTTGTATATAAGGGAAGTCTTGAGACCCATGAAGTTGTTGCAATAAAAGTCCTCAACCTTCATGTTAAGGGAGCTCACAAGAGTTTTATGGCTGAATGTAACTCACTCAAAAATAGAAGGCATCGAAATTTGGCAAAAATTTTGACATGTTGCTCTAGCACAGATTACAAGGGTCACGATTTTAAAGCTCTAGTTTATGAGTACATGGTGAATGGAAATTTGGAAAATTGGTTGCACCCAAGTATAGAAAATCAAAGTCATCAAAGAATCTTGCTCCTTGATCAAATACTGAATATTTTGATTGATGTTGCGTCTGCATTACACTATCTTCATCATGAATGTGAACAACCTCTTGTTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGACAGCAACATGGTTGCTCATGTGAGTGATTTTGGATTGGCAAGACTATTGTCAACTAGTAAAGGCATCTCAAATGAGCAAAGTAGCACAATTGGAATAAAGGGTACTATTGGCTATATTCCTCGAGAATATGGAATGCATGCAGTGATGTCAATGCAAGGTGACATGTATAGCTTTGGGATTCTTGTTTTAGAGATGTTAACGAAAAGAAGACCCACAGAAGACATGTTTAAAGATGGGCACAATCTTCATAGATATGTGGAAATTGCATTTCCAGAAAAGCTGTTGCAGGTTGTGAGTCCATCTATTCTCCCTAGAGAGCCAGGACATGGAGAAGCAACATCAGAAGACATATGGGAGAGTATGATACAAATCCACCCTGATATAGAGAAATGCTTATGTTCCTTATCCAGGATTGGACTTGTTTGTTCAACTGAATCACCACATGAGAGAATGAGTGCAGGAGATGTTATCAAGGAGCTAAACGCTATGAGAAGTTATTTTCCTTTATGTTAA 2997 0.376 MDTRSVSPRRNETDRLCLLKFKESISNDPYHVLDSWNASTHFCNWHGITCGHKHQRVATFELEGYQLHGSISPSIGNLSFLRIIKLGNNSFHGQIPQELGRLFRLQVLDLTRNTLTGEFPVNVTSCSDLKYLSFGRNNLTGKIPVEISSLHKLEELYLHNNNLNGQIPVSMYNLSSLAFLFMMNNNLEGSIPEEIGHMKSLETFQVHSNKLSGAFPSSLYNLSSLVEIAVSNNQFHCSLPASMFNTLPSFKYLILGLNQFYGPIPTSIVNASKLQIISIPDNDFTGSVPNLGKLLDLWSLGLAGNNLGSNSAKDLEFLESLVNCSKLEELDMQDNNFGGHLPNTIGNLSTQLRILSLGINQISGKIPASLGNLIDLSVLATNHNHLTGNIPFTFGKFQKMQFLSLSGNKLSGEIVPFIGNFTQLFHLTLSDNILEGQIPPTIGNCKKLQLLDLSLNKFSRAIPEEIFGLSSLSILLNLSHNSLSGNISSDVGKLTNIGNLDFSCNNLSGNIPETIGDCASLEYILLQGNFFQETIPSSLASLKGLRYLDFSRNNLSGSIPKDLQGLSDLEYLNVSFNMLDGEVPKKGVFSNASAISLIGNSELCGGISELKLPPCRVNDEVERKHLNFRLVVILCCVVAFSLILSSIVVIHYKKKRSKKSSLSSHTVGLLPKVSYQSLHNATDGFSTSNLIGSGRFGFVYKGSLETHEVVAIKVLNLHVKGAHKSFMAECNSLKNRRHRNLAKILTCCSSTDYKGHDFKALVYEYMVNGNLENWLHPSIENQSHQRILLLDQILNILIDVASALHYLHHECEQPLVHCDLKPSNVLLDSNMVAHVSDFGLARLLSTSKGISNEQSSTIGIKGTIGYIPREYGMHAVMSMQGDMYSFGILVLEMLTKRRPTEDMFKDGHNLHRYVEIAFPEKLLQVVSPSILPREPGHGEATSEDIWESMIQIHPDIEKCLCSLSRIGLVCSTESPHERMSAGDVIKELNAMRSYFPLC 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2771 998 ProSitePatterns Protein kinases ATP-binding region signature. 691 713 IPR017441 GO:0005524
Prci10g2771 998 ProSiteProfiles Protein kinase domain profile. 685 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2771 998 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 766 997 - -
Prci10g2771 998 Pfam Leucine rich repeat 525 579 IPR001611 GO:0005515
Prci10g2771 998 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Prci10g2771 998 FunFam LRR receptor-like serine/threonine-protein kinase EFR 313 621 - -
Prci10g2771 998 Pfam Leucine rich repeat N-terminal domain 12 50 IPR013210 -
Prci10g2771 998 FunFam Leucine-rich repeat receptor-like protein kinase 11 169 - -
Prci10g2771 998 SUPERFAMILY L domain-like 11 307 - -
Prci10g2771 998 Gene3D Phosphorylase Kinase; domain 1 645 765 - -
Prci10g2771 998 SMART serkin_6 685 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2771 998 FunFam LRR receptor-like serine/threonine-protein kinase EFR 654 765 - -
Prci10g2771 998 SUPERFAMILY L domain-like 350 605 - -
Prci10g2771 998 Gene3D Transferase(Phosphotransferase) domain 1 766 995 - -
Prci10g2771 998 SMART LRR_typ_2 222 246 IPR003591 -
Prci10g2771 998 SMART LRR_typ_2 150 174 IPR003591 -
Prci10g2771 998 SMART LRR_typ_2 542 565 IPR003591 -
Prci10g2771 998 SMART LRR_typ_2 445 469 IPR003591 -
Prci10g2771 998 SMART LRR_typ_2 78 102 IPR003591 -
Prci10g2771 998 SMART LRR_typ_2 566 591 IPR003591 -
Prci10g2771 998 Gene3D Ribonuclease Inhibitor 297 624 IPR032675 -
Prci10g2771 998 PANTHER OS04G0122200 PROTEIN 204 986 - -
Prci10g2771 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Prci10g2771 998 Pfam Protein kinase domain 687 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2771 998 Gene3D Ribonuclease Inhibitor 10 291 IPR032675 -
Prci10g2771 998 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 171 260 - -
Prci10g2771 998 SUPERFAMILY Protein kinase-like (PK-like) 658 988 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2771 Prci-Chr10 36048472 36053201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2771 11 995 Receptor kinase-like Gene Family AT3G47570 45.236 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci10g2771 Pkinase 7.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2771 - - aprc:113870110 1126.69