Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2721 ATGGGGGATCACTTCGTCTTGCTTGTAGATAGGTTGATTACTGAGTCCACACTAGAAGCTGCTCTGGAAAGCCAAAAACGGTCAATGGAGGTGGCATCCTCTGCTGTGAAAGATACAGAGGTTGACGTCTCTGTAGTGAATATGGATATTGGAGACATGAGATCTCAGGGGAAATTGGTACAGTGCAGGATATGCCATGATGAGGATGAATTCTCCACAATGGAGACACCTTGTTTGTGTTCTGGTAGTTTGAAGTATGCCCATCGACAATGCATACAGCGGTGGTGTAATGAGAAAGGAGACATCACATGTGAGATATGCCTCCAGCAATTTAAACCCGGTTACACTGCTCCCCCTCCACTGTTTCGATTAGGGCGTCTTCGAATGAATTTCAGCAGGAGAAATTGGGAAATATCAAGAAGAGACTTGCAATTGCATAATGCTACTCAAATTGTTCGTGTTGTCTCGCCTGACCAGAATCTTGCCGATTTTACCTGTGATCAGTGTTCAGCATCTGCTATCTTTTGTTCAATTTCAATCTTTATCTTGATTATACTGATACTGAAACATGCTCTCTCGCTACTTGAAATGATTGGAAGTGTGGAATATTCCTTGCCAATCTATATGTTATTGCTTGCACGGATTCTGGGTGTGACTTTGTCTATTTATGTCATGCGGAGAACTGTGAACTTTGTGCAGCAGCAGCGGCAACAACGACTAGTGGAACCTCGTACTGCATCTGGTAGTCAATACAGCAACCAGAATGACCAACAGGCTTTGCAACGTCAGCCACAAGTCGCTCCTGTATAG 810 0.4395 MGDHFVLLVDRLITESTLEAALESQKRSMEVASSAVKDTEVDVSVVNMDIGDMRSQGKLVQCRICHDEDEFSTMETPCLCSGSLKYAHRQCIQRWCNEKGDITCEICLQQFKPGYTAPPPLFRLGRLRMNFSRRNWEISRRDLQLHNATQIVRVVSPDQNLADFTCDQCSASAIFCSISIFILIILILKHALSLLEMIGSVEYSLPIYMLLLARILGVTLSIYVMRRTVNFVQQQRQQRLVEPRTASGSQYSNQNDQQALQRQPQVAPV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2721 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 117 IPR013083 -
Prci10g2721 269 FunFam Zinc finger family protein 51 117 - -
Prci10g2721 269 CDD RING_CH-C4HC3_MARCH 62 107 - -
Prci10g2721 269 SMART ringv_2 61 108 IPR011016 GO:0008270
Prci10g2721 269 ProSiteProfiles Zinc finger RING-CH-type profile. 54 114 IPR011016 GO:0008270
Prci10g2721 269 MobiDBLite consensus disorder prediction 242 269 - -
Prci10g2721 269 SUPERFAMILY RING/U-box 60 112 - -
Prci10g2721 269 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 239 IPR033275 -
Prci10g2721 269 Pfam RING-variant domain 62 107 IPR011016 GO:0008270
Prci10g2721 269 Pfam Protein of unknown function (DUF3675) 113 228 IPR022143 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2721 Prci-Chr10 35546003 35551008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2721 62 107 C3H Transcription Factor Family AT2G37950 46.939 2.12e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2721 - - pcin:129297393 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2721 10 35546003 35551008 Prci10g2721 10 35546003 35551008 ECH