Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2664 ATGGAAGGTAGAAGAGTGTCACTGTACAACTGTGTTCCAAGATATGCACAAGGCAGTGACATTTTAGTGGTTCACAATGACACTTCGTCTCTTCGCTATCTCTCTTCACTGCTTCGCCAATGCTCTTTCACAGTTACTGCTACAAATCAAGCATCAGCAGCTATTGACATGGTTTTCCAACAAGAAGGAAGGTTCAAACTTGTGATGGCCAAAGCTAAAATGCCTGACATGAGCACCATTTATTTCCTCAAAACTCTGCTTCTGAAGCATATCACTGTCATTTTTATTTCCTCTGGACAAGATGATGGTGGAGCAAAGGAAGCTTTTGATAAAGGATCATGTTATCTCCTACGGGAACCAATCCAAACAGAGGATCTCATATCTGTGTGGCAACAAGTCTATAACACTAATAACAGCGTAGCACAAGAGATTCACACTGCAAAATCTAAACAAAAGGCGTATTATGAAACAAGTGAAATGCAAGACAGAAATCATGATGATATCAGAGTCAAGAAAAAAGGGAAGAGAGCACTTAATTCACACCAGGTGAAATTAGGCAACAATAATCATGCTGCAGAGGAGGAAGAGGAAGCAAGAGAACATAACAACAATCAATTCCCTCAGAAAAAGCCACGCATTTCTTGGACTTCGGATCTGCATCATAAGTTTGTACAGGCCATAAGTGTTCTGTGGGAGAAGGAGAACAATATTCGTCCAAAATTGATCCAGGAGATGATGAATGTTCCTTACCTGACATGTCGCCATATTGCTAGCCATCTACAGAAATTCAAATCTCAAGTAAGGGGTCTTCAGGATAAGTGTAATAATTATTCACCTCCTGCGAGTAAGTTATCAAACTTCAGGGATGGAACCGAGTCATCCTCGGCATTTCATAGCCAGTATTACCCAGGTCACCTCACATTAGCTGCTTTCCGAAATGAGAACCAAAATCAAAACCAGCTTCTAGTGAACTTTTCTGAAACTGAAGGCCTGGAAAATTTCCAGGAGCAGGAAAACGCAGCCTGTGCAAACTTTTCATTCCAACATCCATCAGAATTGGTCAATTATGGAAACCAAGATCTAGAAGCCGTAGTGAGAGGAGCTGTGCCAGCTGCTTTAATGAATAAAAATCAATATGATTGCTTTGCAAATGGATCCAATGGAGATTAA 1170 0.4068 MEGRRVSLYNCVPRYAQGSDILVVHNDTSSLRYLSSLLRQCSFTVTATNQASAAIDMVFQQEGRFKLVMAKAKMPDMSTIYFLKTLLLKHITVIFISSGQDDGGAKEAFDKGSCYLLREPIQTEDLISVWQQVYNTNNSVAQEIHTAKSKQKAYYETSEMQDRNHDDIRVKKKGKRALNSHQVKLGNNNHAAEEEEEAREHNNNQFPQKKPRISWTSDLHHKFVQAISVLWEKENNIRPKLIQEMMNVPYLTCRHIASHLQKFKSQVRGLQDKCNNYSPPASKLSNFRDGTESSSAFHSQYYPGHLTLAAFRNENQNQNQLLVNFSETEGLENFQEQENAACANFSFQHPSELVNYGNQDLEAVVRGAVPAALMNKNQYDCFANGSNGD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2664 389 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 286 IPR045279 GO:0009736
Prci10g2664 389 SMART REC_2 19 130 IPR001789 GO:0000160
Prci10g2664 389 FunFam Two-component response regulator 207 271 - -
Prci10g2664 389 MobiDBLite consensus disorder prediction 186 211 - -
Prci10g2664 389 SUPERFAMILY CheY-like 18 142 IPR011006 -
Prci10g2664 389 Gene3D - 207 269 - -
Prci10g2664 389 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 265 IPR006447 GO:0003677
Prci10g2664 389 ProSiteProfiles Response regulatory domain profile. 20 134 IPR001789 GO:0000160
Prci10g2664 389 Pfam Response regulator receiver domain 21 128 IPR001789 GO:0000160
Prci10g2664 389 MobiDBLite consensus disorder prediction 188 206 - -
Prci10g2664 389 Gene3D - 19 156 - -
Prci10g2664 389 SUPERFAMILY Homeodomain-like 208 267 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2664 Prci-Chr10 35106394 35109463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2664 14 272 Response Regulator Gene Family AT4G31920 28.077 3.63e-29 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci10g2664 Response_reg 1.4e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2664 - - pcin:129322591 763.451