Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2658 ATGAACCTAGCAACAGCCTTCGCCATCATCGTCTTCTCTGTTCTCATCAGAATCATCCTCTGTTCTGTCAATCCAAAGTTCCAAGCTTGCGAACCCAAAACCTGTGGAAACGGCCCCAACATAAGCTACCCCTTCCATCTCGTAGGTAGACAAGACCCCTTCTGCGGATTCCCTCGTTTTGACCTTATCTGTGCTCCCAATGGCTTCCCATCACTCAATCTCTCCAATACTCTGTACATCGTCGGGGAAATCTTCTACCGCAATAATTCTCTTCGAGTCTCCAACCCTAAATTACAAAGCTCCAATTCCAACAATTGTCTCTCTCCTTCAAACAACCTTACTCTTTACGGCGACAGGTTCGATTTCGCCCCGAACCAGACACAGTTGTTGCTGTTCTTCAATTGTGACACGTCGTCGCTGCCGGATGATATGAGAGAGAACAGGGTGGGGTGTTCGGAAGGGAACAGAACGAGGTCGGTGTTGGGTTTGGCGGTGGACGATGATGAGGAAAAGTTGAAGTATGCAAAGGATAATTGCAGAGGCGGCGAGGTGATGACGACGGTGGTGGAAAATGTGGAAGGAGGGATCGCAGAGGCGTTGGGAAGAGGGTTCGTGTTGAAGTCAGCGAACTGGACGGCGAGCAGGTGCGACGAATGCAAGAGAAGTGGAGGGAGGTGTGGCTTCGAATTTGAAGGGTATAGATTCAGGTGCTATTGCCCGGACGGCGATACTCATCGGAGCTGTCCTTCTGAGAATCGGGTGAATAAGCTGCCATTGAGATTAGGATTAGGGATTGGAATCCCGTTGGTGATAACGATTGGGATGATCGTATGGTGGCGGTGGAAAAGAAAATCCGAGGATTCAGATTCAATTAACATATACGGTGGTCATTCCCGCTTTGAGGGCAGCAATGTGTACTTTGGAGTCCCTGTTTTCTCGTATTCGGAGCTCGAAGCAGCTACCAACAATTTTGACCCGACCCGAGAACTCGGAGACGGTGGCTTTGGCACTGTCTACTACGGTAAACTTGAAGATGAACGTGAAGTTGCAGTGAAACGCCTATACGAGCAAAACTATAGACAAGTAGAACACTTCATTAATGAAGTCAAGATCCTCACTCGCCTACACCACAAAAACCTCGTCTCTCTCTATGGCTGCACCTCTCACCATAGTCGTGAGCTCCTCCTTGTCTATGAATTTATCCCAAACGGCACTGTCGCTCATCACCTCCACCTTCACAGAGACCCAAAAAAGCCCACCGTTTTACCATGGTCCACTCGCATGAAAATCGCTGTCCAAACGGCAAGAGCATTGGTCTACCTCCACGCTTCCGACATCATCCACCGCGACATCAAAACCAACAACATTCTCCTCGACGAAGGCTTCAATGTCAAGGTTGCAGATTTTGGACTCTCGAGGTTGTTCCCTGACAATGTTACTCATGTTTTCACTGCTCCTCAAGGGACACCAGGTTATCTGGATCCTGAATACCATCAATGTTATCAGCTCACGAGCAAGAGCGATGTTTATAGTTTTGGAGTTGTGCTCATCGAGCTCATAACATCAATGGCAGCGGTCGACATGAGCCGAGATTCGGACTCGATTAACTTGTCGAGTTTAGCAGTGAGGAAGATTCAGAGGAGTGAGCTGAGTGAGTTGGTGGATCCTTCTCTTGGGTTTGAGACTGATGGGGAAGTGGAGAGGATGGTGGTTCTGGTGGCTCAGTTGGCGTTTCGGTGTTTACAGAATAACAAGGAATGGAGACCTTCCATGGAGGAGGTGTTGGAGACGTTGGAGAGGATTCAAAGTGGGAGTGATCTAGTACAGGATGCCCCACGATTGCCTCCAGAATCGCCCAATTGGGATGAGGTTGGCTTGTTGAGGAACATGAAGCCACCACCTCGTTCTCCAAACAGTGTTGCTGATAAATGGGGAAGTGAATCTACAACGCCTGGTGTCAGTGGTTAA 1968 0.4888 MNLATAFAIIVFSVLIRIILCSVNPKFQACEPKTCGNGPNISYPFHLVGRQDPFCGFPRFDLICAPNGFPSLNLSNTLYIVGEIFYRNNSLRVSNPKLQSSNSNNCLSPSNNLTLYGDRFDFAPNQTQLLLFFNCDTSSLPDDMRENRVGCSEGNRTRSVLGLAVDDDEEKLKYAKDNCRGGEVMTTVVENVEGGIAEALGRGFVLKSANWTASRCDECKRSGGRCGFEFEGYRFRCYCPDGDTHRSCPSENRVNKLPLRLGLGIGIPLVITIGMIVWWRWKRKSEDSDSINIYGGHSRFEGSNVYFGVPVFSYSELEAATNNFDPTRELGDGGFGTVYYGKLEDEREVAVKRLYEQNYRQVEHFINEVKILTRLHHKNLVSLYGCTSHHSRELLLVYEFIPNGTVAHHLHLHRDPKKPTVLPWSTRMKIAVQTARALVYLHASDIIHRDIKTNNILLDEGFNVKVADFGLSRLFPDNVTHVFTAPQGTPGYLDPEYHQCYQLTSKSDVYSFGVVLIELITSMAAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLGFETDGEVERMVVLVAQLAFRCLQNNKEWRPSMEEVLETLERIQSGSDLVQDAPRLPPESPNWDEVGLLRNMKPPPRSPNSVADKWGSESTTPGVSG 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2658 655 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 647 IPR044652 GO:0004672
Prci10g2658 655 SMART serkin_6 324 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2658 655 MobiDBLite consensus disorder prediction 641 655 - -
Prci10g2658 655 MobiDBLite consensus disorder prediction 606 655 - -
Prci10g2658 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Prci10g2658 655 Pfam Wall-associated receptor kinase galacturonan-binding 30 94 IPR025287 GO:0030247
Prci10g2658 655 CDD STKc_IRAK 330 601 - -
Prci10g2658 655 Gene3D Phosphorylase Kinase; domain 1 301 400 - -
Prci10g2658 655 ProSiteProfiles Protein kinase domain profile. 324 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2658 655 Pfam Protein kinase domain 327 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2658 655 FunFam Wall-associated receptor kinase-like 20 401 610 - -
Prci10g2658 655 Gene3D Transferase(Phosphotransferase) domain 1 401 611 - -
Prci10g2658 655 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Prci10g2658 655 SUPERFAMILY Protein kinase-like (PK-like) 309 627 IPR011009 -
Prci10g2658 655 Pfam Wall-associated receptor kinase C-terminal 152 242 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2658 Prci-Chr10 35013361 35023429 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2658 216 655 Receptor kinase-like Gene Family AT1G25390 55.011 6.44e-159 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci10g2658 Pkinase 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2658 - - aip:107643858 733.021