Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2653 ATGGCTTCAGTTTCTGTGTTTCCTTTCCCCTTGTTTCTCTTTCACTTTGTACTTCTTTTCCTGGCTGGTTATGGAAATGGGAACCATGAGAAGTGTCCTACATCTTTTGATTGCGGACAATTTGGGAGCCTCCACTTCCCTTTCACTAAGCCAGAACTGCAACACTGTGGCTTTATGACCATATATGGTTGTGAATCTCCAGTTAAAACGATTCAACTGGAAAAGAATGGAAAACCATTACTGCTTACAAATGTCGTTCAGCAGGAGAATATCATCACAGTTTTTGACCTAGATCTGCGCGAGCATTTGAAGCATAGAACCTGTGAAGTTTTCAACAGTAACGTGACTCTTCCTCTAAATTCTCCTTTGGCTTCCTTTCATATCAAACACAACGTGACTCTGTTCATATGCAACCACGACCTCCACATCAGCACCCCCAATGGTTTCATCAATCATGTCTGTCCTGACTACGATATCTTTAGTCACGACTTACACGGGCTTCCTCCTCCTATTATTGACCAGGCATTTGGATCTTTTACTACTTGCTCGATTCTTCAGCTTCCTTGTAAGAACCTGACATATACCACAGATTTTTCATCATTCTTTTGTGGTGAAATAGATATTGAAGTGCAATTATCTGATGATTGTGACAAGTGCTACAACCACAAAGGCGGCCAATGTCTAGTTGACAATCACAATAACTTTTACTGTGACACAGCAGAGACTGGGAGTATGCTATTCAACTTGGAGCTTGGACTTGGGCTTGGAGGTAAGGTTCATTATCCTTTTCTTCAAAGCCTTTTAAAGATCCTTGGGATCTCCTCCTTTGCAGGTTTATTTATTGGATTTACAGGCTTTCTAATCATAATTTGGTGGCTCCTTAAACAGCATTACAAGCAAAAATATGCATTTTCAAGCATCCAATTGCAATCAATAAACAGTGATGCAATTGATCCCAGTTCTGATACTGATTTAGAAAGTGGCAGGTATTTTGGGATCCGCCTATTCTCTTACGAGGAGCTTGAAAAAGCAACAAATAATTTTGACCGTTCCAGAGAACTTGGGAATGGAGGCTTTAGCTCTATTTACTATGGAAAACTCCAAGACGGACGAGAAGTTGCAGTGAAACGTCTATATAACCATAACTATCGACGACTTGAACAGTTTCTAAATGAAGTTGTGATCTTCACTCGCTTGCGCCATGAAAACCTTGTGTCTCTTCATGGCTGCACCTCCCACCACAGTCGTGAACTTCTCCTTGTGTATGAATATGTTCCAAATAGCACTGTTTCATGTCATCTTCATGGTAAGCTAGCCAACCGTCATTTACTACCATGGCCTATAAGAATGAAGATAGCCATAGAAACTGCAGCTGCATTGGCTTATCTTCATGCTTCTGAAATCATCCACTGTGATGTCAAAACTGACAATATTCTCCTAGGCAACAGTTTTTCTATCAAGGTTGCAGGTTTTGGACTTTCACAATTGTCCCTCATCCATGACACTTGTGTTTCCACTACCCCACAAGGGACCCCTGGTTATACTGACCCAGAATCTAACCAAGGCACTCAACTTACTAGCAAAAGTGATGTCTATAGCTTTGGAGTTGTACTCATTGAGTTGATATCATCTCTGCCAGCAATTGAGATGAGCAGGCATAAAGAGGAGATAATTCTGGCAAATCTAGCTATAAAGAAAATTCAGAAAAGCACACTATGGGAGCTAGTTGATCCTTCTCTTGGTTTTGAGTCAGATAATGAGGTTAGGAGGATGATAGTTTTAGTGGCAGAGCTGGCTTTTCAGTGTTTACAGAGAGACAAGGAATTGAGACCTTCCATAGACGAGGCTTTGGAGATACTAAGAAGAATTGAGAGTGGGAAATAG 1884 0.4092 MASVSVFPFPLFLFHFVLLFLAGYGNGNHEKCPTSFDCGQFGSLHFPFTKPELQHCGFMTIYGCESPVKTIQLEKNGKPLLLTNVVQQENIITVFDLDLREHLKHRTCEVFNSNVTLPLNSPLASFHIKHNVTLFICNHDLHISTPNGFINHVCPDYDIFSHDLHGLPPPIIDQAFGSFTTCSILQLPCKNLTYTTDFSSFFCGEIDIEVQLSDDCDKCYNHKGGQCLVDNHNNFYCDTAETGSMLFNLELGLGLGGKVHYPFLQSLLKILGISSFAGLFIGFTGFLIIIWWLLKQHYKQKYAFSSIQLQSINSDAIDPSSDTDLESGRYFGIRLFSYEELEKATNNFDRSRELGNGGFSSIYYGKLQDGREVAVKRLYNHNYRRLEQFLNEVVIFTRLRHENLVSLHGCTSHHSRELLLVYEYVPNSTVSCHLHGKLANRHLLPWPIRMKIAIETAAALAYLHASEIIHCDVKTDNILLGNSFSIKVAGFGLSQLSLIHDTCVSTTPQGTPGYTDPESNQGTQLTSKSDVYSFGVVLIELISSLPAIEMSRHKEEIILANLAIKKIQKSTLWELVDPSLGFESDNEVRRMIVLVAELAFQCLQRDKELRPSIDEALEILRRIESGK 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2653 627 Gene3D Phosphorylase Kinase; domain 1 320 424 - -
Prci10g2653 627 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 626 IPR044652 GO:0004672
Prci10g2653 627 Gene3D Transferase(Phosphotransferase) domain 1 425 625 - -
Prci10g2653 627 SMART serkin_6 348 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2653 627 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Prci10g2653 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Prci10g2653 627 SUPERFAMILY Protein kinase-like (PK-like) 324 620 IPR011009 -
Prci10g2653 627 ProSiteProfiles Protein kinase domain profile. 348 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2653 627 Pfam Protein kinase domain 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2653 Prci-Chr10 34925705 34929294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2653 36 625 Receptor kinase-like Gene Family AT1G25390 42.857 1.78e-136 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci10g2653 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2653 - - gmx:100791822 652.514