LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g2651	ATGCGGGATTGGAAAATTTTGCATTATCTTGTTTTCTTTAATATGAGTAGCAATGGTGGTAATCAAAGCACCAGAGATATCATCTGCAACGCGGGTGCTGGAGCTGCTGCTGGGGCTATAGCCGCTACATTTGTTTGTCCACTGGATGTAATCAAGACGAGACTACAAGTTCGTGGCCTTCCTCATGGGCAGAAAGGTAGTGTCATCATCACGAGCTTGCGGAATATTGTCAACTCTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATACTAGCATTACTTCCAACCTGGGCAGTGTACTTCTCTGTTTATGGTCAACTGAAAGGCCTTATCCTTTCACGAGATGGTTGCATCCAATTATCAACTGTCGGAAATATGGTGGCTGCTGCTGGTGCTGGAGCAGCGACTGCAATTTCAACAAATCCATTGTGGGTTGTTAAGACCAGACTCCAAACTCAAGGAATGAGGTCTGATGTGGTTCCGTACAAAAGTATTCTTTCTGCACTGACGAGAATAACACATGAGGAAGGCATACGAGGACTATATAGTGGCATTGTGCCTTCCTTGGCTGGTGTAAGTCATGTTGCAATTCAGTTCCCTGCATATGAAAAGATCAAGTCTTACTTGGCAGAAAAGGATGATACAACTGTTGATCAACTTAGTCCAGGAAAAGTTGCCATTGCATCCTCAATTTCAAAAGTAATTGCCTCTGTAATGACTTATCCACATGAGGTGATACGTTCGAGGCTACAGGAGCAAGGCCAGGCCAAAAGTGCCGGGGTCCAATATGCTGGGCTTGTTGACTGTTCTAGGAAGGTGTTCCATACTGAAGGCCTCCCCGGCTTTTATCGAGGTTGCGCGACAAATTTACTAAGAACTACTCCATCAGCTGTAATTACATTCACCAGCTTTGAGATGATACACAGGTTTCTGCAACGTGTTGTACCTCAGGACATTGGGTACTCGCAAGGGTCTTCTAAACCAGATGACCTTAGCAAGTCCCAGCCAAAAGACAATGACGTAAAATTCGAAAACAAAAGGGATTGGAGGAAATCTCCATCTGAGCCTAATAAGAAAGCTTTAAATAACGAGCAGCTATCTAGACACTGA	1119	0.4459	MRDWKILHYLVFFNMSSNGGNQSTRDIICNAGAGAAAGAIAATFVCPLDVIKTRLQVRGLPHGQKGSVIITSLRNIVNSEGFRGMYRGLSPTILALLPTWAVYFSVYGQLKGLILSRDGCIQLSTVGNMVAAAGAGAATAISTNPLWVVKTRLQTQGMRSDVVPYKSILSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYLAEKDDTTVDQLSPGKVAIASSISKVIASVMTYPHEVIRSRLQEQGQAKSAGVQYAGLVDCSRKVFHTEGLPGFYRGCATNLLRTTPSAVITFTSFEMIHRFLQRVVPQDIGYSQGSSKPDDLSKSQPKDNDVKFENKRDWRKSPSEPNKKALNNEQLSRH	372

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g2651	372	Gene3D	Mitochondrial carrier domain	7	118	IPR023395	-
	Prci10g2651	372	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	25	113	IPR018108	-
	Prci10g2651	372	MobiDBLite	consensus disorder prediction	334	372	-	-
	Prci10g2651	372	Pfam	Mitochondrial carrier protein	123	215	IPR018108	-
	Prci10g2651	372	Pfam	Mitochondrial carrier protein	30	115	IPR018108	-
	Prci10g2651	372	Pfam	Mitochondrial carrier protein	223	316	IPR018108	-
	Prci10g2651	372	PRINTS	Mitochondrial carrier protein signature	88	108	IPR002067	GO:0055085
	Prci10g2651	372	PRINTS	Mitochondrial carrier protein signature	232	254	IPR002067	GO:0055085
	Prci10g2651	372	PRINTS	Mitochondrial carrier protein signature	30	43	IPR002067	GO:0055085
	Prci10g2651	372	PRINTS	Mitochondrial carrier protein signature	43	57	IPR002067	GO:0055085
	Prci10g2651	372	PRINTS	Mitochondrial carrier protein signature	138	156	IPR002067	GO:0055085
	Prci10g2651	372	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	123	211	IPR018108	-
	Prci10g2651	372	PANTHER	MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED	27	319	IPR044712	GO:0006862\|GO:0055085
	Prci10g2651	372	SUPERFAMILY	Mitochondrial carrier	26	309	IPR023395	-
	Prci10g2651	372	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	223	313	IPR018108	-
	Prci10g2651	372	Gene3D	Mitochondrial carrier domain	119	317	IPR023395	-
	Prci10g2651	372	MobiDBLite	consensus disorder prediction	324	372	-	-
	Prci10g2651	372	FunFam	Nicotinamide adenine dinucleotide transporter 2, mitochondrial	26	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g2651	Prci-Chr10	34913166	34919197	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g2651	22	361	Chloroplast and Mitochondria Gene Families	AT1G25380	65.330	1.27e-147	420

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g2651	K15115		-	gmx:100816376	535.798