LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g2650	ATGCGGGATTGGAAAATTTTGCATTATCTTGTTTTCTTTAATATGAGTAGCAATGGTGGTAATCAAAGCACCAGAGATATCATCTGCAACGCGGGTGCTGGAGCTGCTGCTGGGGCTATAGCCGCTACATTTGTTTGTCCACTGGATGTAATCAAGACGAGACTACAAGTTCGTGGCCTTCCTCATGGGCAGAAAGGTAGTGTCATCATCACGAGCTTGCGGAATATTGTCAACTCTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATACTAGCATTACTTCCAACCTGGGCAGTGTACTTCTCTGTTTATGGTCAACTGAAAGGCCTTATCCTTTCACGAGCAGATGGTTGCATCCAATTATCAACTGTCGGAAATATGGTGGCTGCTGCTGGTGCTGGAGCAGCGACTGCAATTTCAACAAATCCATTGTGGGTTGTTAAGACCAGACTCCAAACTCAAGGAATGAGGTCTGATGTGGTTCCGTACAAAAGTATTCTTTCTGCACTGACGAGAATAACACATGAGGAAGGCATACGAGGACTATATAGTGGCATTGTGCCTTCCTTGGCTGGTGTAAGTCATGTTGCAATTCAGTTCCCTGCATATGAAAAGATCAAGTCTTACTTGGCAGAAAAGGATGATACAACTGTTGATCAACTTAGTCCAGGAAAAGTTGCCATTGCATCCTCAATTTCAAAAGTAATTGCCTCTGTAATGACTTATCCACATGAGGTGATACGTTCGAGGCTACAGGAGCAAGGCCAGGCCAAAAGTGCCGGGGTCCAATATGCTGGGCTTGTTGACTGTTCTAGGAAGGTGTTCCATACTGAAGGCCTCCCCGGCTTTTATCGAGGTTGCGCGACAAATTTACTAAGAACTACTCCATCAGCTGTAATTACATTCACCAGCTTTGAGATGATACACAGGTTTCTGCAACGTGTTGTACCTCAGGACATTGGGTACTCGCAAGGGTCTTCTAAACCAGATGACCTTAGCAAGTCCCAGCCAAAAGACAATGACGTAAAATTCGAAAACAAAAGGGATTGGAGGAAATCTCCATCTGAGCCTAATAAGAAAGCTTTAAATAACGAGCAGCTATCTAGACACTGA	1122	0.4465	MRDWKILHYLVFFNMSSNGGNQSTRDIICNAGAGAAAGAIAATFVCPLDVIKTRLQVRGLPHGQKGSVIITSLRNIVNSEGFRGMYRGLSPTILALLPTWAVYFSVYGQLKGLILSRADGCIQLSTVGNMVAAAGAGAATAISTNPLWVVKTRLQTQGMRSDVVPYKSILSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYLAEKDDTTVDQLSPGKVAIASSISKVIASVMTYPHEVIRSRLQEQGQAKSAGVQYAGLVDCSRKVFHTEGLPGFYRGCATNLLRTTPSAVITFTSFEMIHRFLQRVVPQDIGYSQGSSKPDDLSKSQPKDNDVKFENKRDWRKSPSEPNKKALNNEQLSRH	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g2650	373	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	25	113	IPR018108	-
	Prci10g2650	373	FunFam	Nicotinamide adenine dinucleotide transporter 2, mitochondrial	26	315	-	-
	Prci10g2650	373	Pfam	Mitochondrial carrier protein	224	317	IPR018108	-
	Prci10g2650	373	Pfam	Mitochondrial carrier protein	30	115	IPR018108	-
	Prci10g2650	373	Pfam	Mitochondrial carrier protein	124	216	IPR018108	-
	Prci10g2650	373	Gene3D	Mitochondrial carrier domain	119	322	IPR023395	-
	Prci10g2650	373	PRINTS	Mitochondrial carrier protein signature	88	108	IPR002067	GO:0055085
	Prci10g2650	373	PRINTS	Mitochondrial carrier protein signature	139	157	IPR002067	GO:0055085
	Prci10g2650	373	PRINTS	Mitochondrial carrier protein signature	30	43	IPR002067	GO:0055085
	Prci10g2650	373	PRINTS	Mitochondrial carrier protein signature	43	57	IPR002067	GO:0055085
	Prci10g2650	373	PRINTS	Mitochondrial carrier protein signature	233	255	IPR002067	GO:0055085
	Prci10g2650	373	MobiDBLite	consensus disorder prediction	325	373	-	-
	Prci10g2650	373	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	224	314	IPR018108	-
	Prci10g2650	373	Gene3D	Mitochondrial carrier domain	8	118	IPR023395	-
	Prci10g2650	373	MobiDBLite	consensus disorder prediction	335	373	-	-
	Prci10g2650	373	PANTHER	MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED	27	320	IPR044712	GO:0006862\|GO:0055085
	Prci10g2650	373	SUPERFAMILY	Mitochondrial carrier	26	310	IPR023395	-
	Prci10g2650	373	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	124	212	IPR018108	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g2650	Prci-Chr10	34913166	34919197	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g2650	22	362	Chloroplast and Mitochondria Gene Families	AT1G25380	65.143	1.28e-146	417

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g2650	K15115		-	gmx:100816376	531.176