LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g2649	ATGAGTAGCAATGGTGGTAATCAAAGCACCAGAGATATCATCTGCAACGCGGGTGCTGGAGCTGCTGCTGGGGCTATAGCCGCTACATTTGTTTGTCCACTGGATGTAATCAAGACGAGACTACAAGTTCGTGGCCTTCCTCATGGGCAGAAAGGTAGTGTCATCATCACGAGCTTGCGGAATATTGTCAACTCTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATACTAGCATTACTTCCAACCTGGGCAGTGTACTTCTCTGTTTATGGTCAACTGAAAGGCCTTATCCTTTCACGAGCAGATGGTTGCATCCAATTATCAACTGTCGGAAATATGGTGGCTGCTGCTGGTGCTGGAGCAGCGACTGCAATTTCAACAAATCCATTGTGGGTTGTTAAGACCAGACTCCAAACTCAAGGAATGAGGTCTGATGTGGTTCCGTACAAAAGTATTCTTTCTGCACTGACGAGAATAACACATGAGGAAGGCATACGAGGACTATATAGTGGCATTGTGCCTTCCTTGGCTGGTGTAAGTCATGTTGCAATTCAGTTCCCTGCATATGAAAAGATCAAGTCTTACTTGGCAGAAAAGGATGATACAACTGTTGATCAACTTAGTCCAGGAAAAGTTGCCATTGCATCCTCAATTTCAAAAGTAATTGCCTCTGTAATGACTTATCCACATGAGGTGATACGTTCGAGGCTACAGGAGCAAGGCCAGGCCAAAAGTGCCGGGGTCCAATATGCTGGGCTTGTTGACTGTTCTAGGAAGGTGTTCCATACTGAAGGCCTCCCCGGCTTTTATCGAGGTTGCGCGACAAATTTACTAAGAACTACTCCATCAGCTGTAATTACATTCACCAGCTTTGAGATGATACACAGGTTTCTGCAACGTGTTGTACCTCAGGACATTGGGTACTCGCAAGGGTCTTCTAAACCAGATGACCTTAGCAAGTCCCAGCCAAAAGACAATGACGTAAAATTCGAAAACAAAAGGGATTGGAGGAAATCTCCATCTGAGCCTAATAAGAAAGCTTTAAATAACGAGCAGCTATCTAGACACTGA	1080	0.4528	MSSNGGNQSTRDIICNAGAGAAAGAIAATFVCPLDVIKTRLQVRGLPHGQKGSVIITSLRNIVNSEGFRGMYRGLSPTILALLPTWAVYFSVYGQLKGLILSRADGCIQLSTVGNMVAAAGAGAATAISTNPLWVVKTRLQTQGMRSDVVPYKSILSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYLAEKDDTTVDQLSPGKVAIASSISKVIASVMTYPHEVIRSRLQEQGQAKSAGVQYAGLVDCSRKVFHTEGLPGFYRGCATNLLRTTPSAVITFTSFEMIHRFLQRVVPQDIGYSQGSSKPDDLSKSQPKDNDVKFENKRDWRKSPSEPNKKALNNEQLSRH	359

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g2649	359	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	210	300	IPR018108	-
	Prci10g2649	359	Pfam	Mitochondrial carrier protein	210	303	IPR018108	-
	Prci10g2649	359	Pfam	Mitochondrial carrier protein	110	202	IPR018108	-
	Prci10g2649	359	Pfam	Mitochondrial carrier protein	16	101	IPR018108	-
	Prci10g2649	359	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	11	99	IPR018108	-
	Prci10g2649	359	MobiDBLite	consensus disorder prediction	311	359	-	-
	Prci10g2649	359	FunFam	Nicotinamide adenine dinucleotide transporter 2, mitochondrial	12	301	-	-
	Prci10g2649	359	Gene3D	Mitochondrial carrier domain	105	308	IPR023395	-
	Prci10g2649	359	Gene3D	Mitochondrial carrier domain	2	104	IPR023395	-
	Prci10g2649	359	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	110	198	IPR018108	-
	Prci10g2649	359	MobiDBLite	consensus disorder prediction	321	359	-	-
	Prci10g2649	359	SUPERFAMILY	Mitochondrial carrier	12	296	IPR023395	-
	Prci10g2649	359	PRINTS	Mitochondrial carrier protein signature	74	94	IPR002067	GO:0055085
	Prci10g2649	359	PRINTS	Mitochondrial carrier protein signature	29	43	IPR002067	GO:0055085
	Prci10g2649	359	PRINTS	Mitochondrial carrier protein signature	125	143	IPR002067	GO:0055085
	Prci10g2649	359	PRINTS	Mitochondrial carrier protein signature	16	29	IPR002067	GO:0055085
	Prci10g2649	359	PRINTS	Mitochondrial carrier protein signature	219	241	IPR002067	GO:0055085
	Prci10g2649	359	PANTHER	MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED	13	306	IPR044712	GO:0006862\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g2649	Prci-Chr10	34913166	34919197	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g2649	8	348	Chloroplast and Mitochondria Gene Families	AT1G25380	65.143	4.24e-147	418

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g2649	K15115		-	gmx:100816376	530.791