Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2647 ATGGCGTCTGGTGGAGGGAGGCATCGCCATCATAATCTTGTGCCTCTTGCTGCATTAATAAGTAGGGAGATTAAGAATGAGAGGATGGAGAAGCCCACTCTGAGGTATGGACATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAATAAAGGCCGATTGTCAGCAAATACCTGGAAATTCTTCCTCAGCATTTTCTGTATTTGCGATCTTTGATGGTCACAACGGAAATGCTGCAGCAATTTTTAGCAGGGAAAATCTGTTAAATCACATTTTGGGTGCTCTTCCTCGAGGAATCGGAAGAGAGGAGTGGCTTCAGGCATTACCTCGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAGTTTCAGAGCAGAGGAGAAACTTCTGGTACTACGGCCACATTTGTGATAGTTGATAGATGGACTGTGACAGTTGCATCAGTTGGAGATTCCCGCTGTATACTAGACACACAGGGTGGCCCTGTTACTAACTTAACTGTTGATCACAGGCTTGAAGAGAATATTGAAGAGAGAGAACGTGTTACTGCAAGTGGAGGCGAAGTTGGAAGACTTAGTATTTATGGTGGTGCTGAGATTGGTCCCCTTCGTTGTTGGCCAGGGGGTCTGTGCCTTTCTAGGTCAATTGGAGACGTGGATGTGGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTGTCAAATGCTGGTGGGAGGCTCATAATTGCTTCAGATGGCATCTGGGATGCTCTGTCCTCAGAAATGGCTGCAAAATCTTGTCGGGGTTTGCCTGCTGAACTTGCTGCTAGGCAGGTTGTGAAGGAAGCATTAAGGACAAGAGGTCTAAAGGACGATACAACTTGCATAGTAGTTGACATAATTCCTCCTGATAATGCATTGCCACCGCCTCCTCCCCCCAAAAAGCAGAATAAATTGAGAGCTTTACTGTTCAGGAAGAAATCCAGTGATTCCACTAGTAAGCTGTCAAAGAAGCTTTCAGCTGTTAATATAGTAGAGGAACTGTTTGAAGAAGGATCAGCCATGCTTGCTGAAAGATTAGGGAATGATGGGAATTCAGGGGAATCAACCTCTGGGATTTTTGTGTGCGCAGTGTGCCAGATAGATCTTGCTTCAAGTGAAGGCATATCTGTTCATGCTGGCTCCATTTTCTCTACCACCTCTAAGCCTTGGCAAGGCCCTTTTCTTTGTGCTGATTGTCGCAACAAGAAGGACGCCATGGAAGGCAAGCGTCCTAGTGGAATTAGAGTCTCGTAG 1287 0.4584 MASGGGRHRHHNLVPLAALISREIKNERMEKPTLRYGHAAQSKKGEDYFLIKADCQQIPGNSSSAFSVFAIFDGHNGNAAAIFSRENLLNHILGALPRGIGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGPVTNLTVDHRLEENIEERERVTASGGEVGRLSIYGGAEIGPLRCWPGGLCLSRSIGDVDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNALPPPPPPKKQNKLRALLFRKKSSDSTSKLSKKLSAVNIVEELFEEGSAMLAERLGNDGNSGESTSGIFVCAVCQIDLASSEGISVHAGSIFSTTSKPWQGPFLCADCRNKKDAMEGKRPSGIRVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2647 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Prci10g2647 428 SMART PP2C_SIG_2 30 297 IPR001932 -
Prci10g2647 428 CDD PP2Cc 36 297 IPR001932 -
Prci10g2647 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Prci10g2647 428 SMART PP2C_4 27 295 IPR001932 -
Prci10g2647 428 Pfam Protein phosphatase 2C 52 282 IPR001932 -
Prci10g2647 428 Gene3D - 35 301 IPR036457 -
Prci10g2647 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Prci10g2647 428 SUPERFAMILY PP2C-like 31 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2647 Prci-Chr10 34885890 34889915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2647 1 427 PP2C-type Phosphatase Gene Family AT1G68410 78.670 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2647 - - qsa:O6P43_032710 744.577