Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2646 ATGATAACTCCACGGTCTATTATGATATTGAGCCGGCGGAGCAAGAAAGATATTTCTCAGCATGTTCAAAAATTGTGCTTCCAACTCCAAGTAAAGGCGAGCCCGATGATTTGGGCTTATCTGATCGAATGGCTCCGGAGGTACGATTATCTGATGCTTGTGATAGGTCTCACCGCCTCCAAGGAGGAATGTGCGGATTTGACAGCCACAACAATTTCCACTGCTATGGAGTTATTAGTTCTTTCAGCTTGGTATGGAAATGCAAGGCATGATCAGTGTCCAAGATCATTTAATTGCGGAGCGCTTGGGAGGCTCCGGTTCCCTTTCACCAAGCCAGAATTGCCGAATTGTGGCTTGATGGTGGTACATAATTGTGATGATTCAAATCCTTCTTCAAATAAAATGATTGAGCTAAAGAAGAATGGAACACCATTTCTGCAGCTTAACGGTGTCTTTCTGCAGCAAAATGGGATTACGGTGTTTGACCAAGATCTACACGATCGTTTGGAATCGAATGGTTCTTGCGAAGCCTTCAACAACAATATCTCAATTCCTGCAAGATCTCCTTTGATTTCTTTTGATATTAGATACAACACAACCCTGTTTAAATGCAACCACAAACTCAATGTCAGCACCCCCAGTGGTTTTATTAAAAATTCCTGTGCAGGCTTTGATATCTATCATTACAGCGTACTCTCTGATCTTAGTCCTCACCAAAAAAGCCTTTTCTCAGCATGTTTAACTCTTGTGCTTCCAAAAAAAGACCTGCCTGATAGCTCAGACCTTCAATCGTTCTTATCTGCTCAAATGACTCTGGAGGTACGAATATCTGATGCTTGTGATAAGTGTTACAATGACGAAGGAGGCTGGTGTCAACTTGACAGCAACAAATACTTCTACTGCAATGCCGTTAGAGAGCGTAGGAGTAAGATTCTGAAGGTGGTACTTGCATCAGCCTTTTCTATTGGAGTTATCATGCTGTTGATCTTGGCTTACTGCTTCAAACGAAAGTTTTTCCATGCTACGTTTTGTCTTTCCTGGGCAAGAAATCATCCAACACAGCAAATAATTGAAGATTTTCTAAAGCAACATAGAACCTCTTTTTCTAAAATTTATAGTTACTCAGAGATAAAGAAAATGACAAGCAACTTCAAAATAAAATTAGGCCAAGGAGGATATGGTATTGTATACAAAGGAAGCCTACTAGATGGGCAACTTGTTGCAGTAAAGGTACTGAGTGAACTAAAAGGTACTGGTGAGGAATTCATCAATGAGGTGGCAAGCATAAGCAGGACTTCTCATGTTAACATTGTTACTCTTTTAGGGTTTTGTTTTGAAGGGTCAAACAAGATTCTTGTTTATGAGTTTATGGCTAATGGATCTTTGGAGAAGTTCATATTTCAAAATGAAGCTAACCTCCATGATGGTAACCTACAGTTGAGTTGTGAAATATTGCACAAGATTGCAGTGGGTGTTGCACGAGGATTAGAGTATTTGCATAGAGGATGTAACACACGGATATTGCATTTTGACATAAAACCTCACAACATTTTGTTGGATGAGAACTTTTGCCCAAAAATCTCAGATTTTGGACTAGCTAAGATATGCCCTGGAAATGAAAGCATTGTATCCATGTTGGGTGCTAGAGGAACCATAGGATATATTGCTCCTGAGGTAATTTATAGAAATTTTGGTGCCGTCTCTCAAAAATCAGATGTTTATAGTTTTGGAATGATGGTTTTGGAAATGGTTGGAGGAAGAAGCAATGTGAATGTTAAGGTTGACAAAACTAGTGAAATATATTTTCCTCATTGGATTTATAAACGTCTAGAATTAAATCAAGACCTTGCATTGCAAAGCCTTAGAGATGAAGGAGACAAAGAGATCATAAGATGGATGGTGATAACAAGCTTATGGTGTATACAAACTAACCCTTCAGACCGTCCAATAATGAGTAAAGTGGTGGAGATGCTTGAAGGCAGAGTTGAGATTGTGCAACTTCCACCAAAGCCTTATTTATCATCTCCTTCTCGATCACCATACCCTTCCTCTTCCTCAACTCCTTGA 2067 0.3957 MITPRSIMILSRRSKKDISQHVQKLCFQLQVKASPMIWAYLIEWLRRYDYLMLVIGLTASKEECADLTATTISTAMELLVLSAWYGNARHDQCPRSFNCGALGRLRFPFTKPELPNCGLMVVHNCDDSNPSSNKMIELKKNGTPFLQLNGVFLQQNGITVFDQDLHDRLESNGSCEAFNNNISIPARSPLISFDIRYNTTLFKCNHKLNVSTPSGFIKNSCAGFDIYHYSVLSDLSPHQKSLFSACLTLVLPKKDLPDSSDLQSFLSAQMTLEVRISDACDKCYNDEGGWCQLDSNKYFYCNAVRERRSKILKVVLASAFSIGVIMLLILAYCFKRKFFHATFCLSWARNHPTQQIIEDFLKQHRTSFSKIYSYSEIKKMTSNFKIKLGQGGYGIVYKGSLLDGQLVAVKVLSELKGTGEEFINEVASISRTSHVNIVTLLGFCFEGSNKILVYEFMANGSLEKFIFQNEANLHDGNLQLSCEILHKIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKICPGNESIVSMLGARGTIGYIAPEVIYRNFGAVSQKSDVYSFGMMVLEMVGGRSNVNVKVDKTSEIYFPHWIYKRLELNQDLALQSLRDEGDKEIIRWMVITSLWCIQTNPSDRPIMSKVVEMLEGRVEIVQLPPKPYLSSPSRSPYPSSSSTP 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2646 688 SMART serkin_6 382 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2646 688 FunFam PR5-like receptor kinase 457 670 - -
Prci10g2646 688 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Prci10g2646 688 FunFam S-receptor-like serine/threonine-protein kinase 351 456 - -
Prci10g2646 688 Gene3D Transferase(Phosphotransferase) domain 1 457 673 - -
Prci10g2646 688 MobiDBLite consensus disorder prediction 669 688 - -
Prci10g2646 688 SUPERFAMILY Protein kinase-like (PK-like) 363 659 IPR011009 -
Prci10g2646 688 ProSiteProfiles Protein kinase domain profile. 382 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2646 688 PANTHER RUST RESISTANCE KINASE LR10-RELATED 354 676 IPR045874 GO:0004672
Prci10g2646 688 Pfam Protein kinase domain 386 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2646 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Prci10g2646 688 Gene3D Phosphorylase Kinase; domain 1 356 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2646 Prci-Chr10 34868952 34883439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2646 87 686 Receptor kinase-like Gene Family AT5G38260 37.043 5.75e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci10g2646 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2646 - - pcin:129284583 1352.04