Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2643 ATGGCGGCCCTCTTCTTCGCTTCCTTCTTCTCTGCACTTTTCTATTTACTTCTCCTTGTTCAGAGCTCCAAAAGCCCAGACTTAGAAGCTCTCATGGCGTTTAAAGCTGCGTCAGACACGTTCAACAAGCTCTCAACTTGGAACTCCAGCACAGACCCTTGTACTTCTTGGTCCGGCGTCTTTTGCCTCCATAACCGAGTCTCTCGTATCGTTCTCGAAGACCTTGATCTCCGAGGCTCTTTCGAGCCTTTGACTTCTCTAACCCAGCTTCGAGTTCTGAGCCTCAAGCAAAACCGCCTCTCCGGCCCCATTCCGAGTCTCTCCAATTTCACGGCCCTGAAACTTTTGTACCTCTCTTACAATGAGTTTTCCGGTGGGTTCCCGGCGACTCTCACATCGCTTTTCCGCTTGTACCGTCTTGATCTGTCTCACAATAACTTATCCGGCGAGATTCCGGCCACGGTCAACCATTTGACCCACGTTCTCACTCTGTGTCTTGACGAGAACCGTTTCTCCGGCAACATTCCCAGTCTGAACCTTCCAAACCTGCAAGATTTCAACGTCTCCGGGAATCGCCTCTCCGGCGAAATTCCCAAATCACTGTCGCGTTTCCCTCAATCGAGTTTCGCCCTAAACCCGTCTCTCTGCGGAGCTCCGATGCAGAAATGTGCCAACTTTGTGGCCGAACCCAGCAAACCCGGATCTGAAGGAGCCATTGCGTCGCCATTAACTCCGCGAAGTAACCCACCACGACCACCAAATATATCATCCACACCGAGCTCCATGCCTGCAAATGAAGCAACAACTCCCAGAAAATCCAACTCACCAGCAAAAATTAGCCCCCTAGCTCTGATCGCTATTATTCTTGGCGACATTGTGGTTCTCGCTGTTGTCTCTCTTCTTCTCTACTGTTACTTCTGGCAAAACTACGCTGCGAAATTGAAAGAAGGAAAAGGTTCGAAGCTCATGGAGAGCGAGAAAATCGTGTACTCATCGAGCCCGTATCCGGTGCAATCGGGCTTTGAGAGGGGTCGAATGGTGTTCTTCGAAGGGGTGAAGAAGTTCGAGCTAGAGGATTTGCTTCGGGCTTCAGCGGAAATGCTGGGAAAAGGCGGGTTCGGGACAGCGTACAAGGCTGTTCTGGACGACGGCAGCGTTGTCGCCGTCAAGAGACTTAAAGACGCTCAGATTGGCGGGAAGAAAGAGTTCGAGCAACACATGGAAATTCTGGGAAGGCTGAGACATCCGAACATTGTTCATCTGAGAGCTTACTATTTTGCCAGAGACGAGAAGTTGCTGGTCTCCGATTACATGCCCAATGGAAGCTTGTTCTGGCTTCTTCATGGTAACCGAGGACCTGGGCGGACCCCACTGGACTGGACCACGAGGCTTAAAATAGCAGCTGGAGCGGCGCGTGGAGTGGCTTTTATTCACAGCTCGTGCAAGTCCCTTAAGCTCACCCACGGTAACATCAAGTCTACAAACATCCTCCTCGACAAGGCGGGAAATGCGCGCGTTGCAGATTTCGGGCTCTCCATCTTTGCTGGCCCCACCGCCCCGAAATCCAACGGTTACCGTGCTCCGGAAGCCCTTGACTGTCGGAGGTGCACTCAGAAATCCGACGTGTACTCCTTGGGCGTCGTCATGCTGGAGATCCTCACCGGGAAGTGCCCCTCCTCCGTGGACGGCGGAGGCTACGGGGGAAGTGCGGTGGTGGATCTTCCGAGGTGGGTACAGTCGGTGGTGAGGGAGGAGTGGACGGCGGAGGTGTTTGATCTTGAGCTCATGAGGTACAAGGATATTGAGGATGAGATGGTGGGGCTGCTTCAGATTGCTCTGGCTTGTACAGCGGCTGCGCCTGATCAACGGCCCAGCATGAGCCACGTGGTCAAGATGATCGAGGAGATACGTGGGGTCGAGGTATCGCCGTGTCATGACACGTTCGACTCTGTGTCTGATTCGCCTTCCGTGTCTGAAGATGCTTCTTGA 1989 0.5309 MAALFFASFFSALFYLLLLVQSSKSPDLEALMAFKAASDTFNKLSTWNSSTDPCTSWSGVFCLHNRVSRIVLEDLDLRGSFEPLTSLTQLRVLSLKQNRLSGPIPSLSNFTALKLLYLSYNEFSGGFPATLTSLFRLYRLDLSHNNLSGEIPATVNHLTHVLTLCLDENRFSGNIPSLNLPNLQDFNVSGNRLSGEIPKSLSRFPQSSFALNPSLCGAPMQKCANFVAEPSKPGSEGAIASPLTPRSNPPRPPNISSTPSSMPANEATTPRKSNSPAKISPLALIAIILGDIVVLAVVSLLLYCYFWQNYAAKLKEGKGSKLMESEKIVYSSSPYPVQSGFERGRMVFFEGVKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEILGRLRHPNIVHLRAYYFARDEKLLVSDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHSSCKSLKLTHGNIKSTNILLDKAGNARVADFGLSIFAGPTAPKSNGYRAPEALDCRRCTQKSDVYSLGVVMLEILTGKCPSSVDGGGYGGSAVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEDEMVGLLQIALACTAAAPDQRPSMSHVVKMIEEIRGVEVSPCHDTFDSVSDSPSVSEDAS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2643 662 FunFam Nuclear pore complex protein NUP107 24 177 - -
Prci10g2643 662 ProSiteProfiles Protein kinase domain profile. 362 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2643 662 MobiDBLite consensus disorder prediction 234 275 - -
Prci10g2643 662 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 438 643 - -
Prci10g2643 662 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Prci10g2643 662 Gene3D Ribonuclease Inhibitor 179 224 IPR032675 -
Prci10g2643 662 MobiDBLite consensus disorder prediction 258 275 - -
Prci10g2643 662 FunFam pollen receptor-like kinase 1 335 437 - -
Prci10g2643 662 Gene3D Ribonuclease Inhibitor 25 178 IPR032675 -
Prci10g2643 662 SUPERFAMILY L domain-like 35 204 - -
Prci10g2643 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 638 IPR046959 -
Prci10g2643 662 Gene3D Phosphorylase Kinase; domain 1 338 437 - -
Prci10g2643 662 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Prci10g2643 662 CDD STKc_IRAK 368 636 - -
Prci10g2643 662 SUPERFAMILY Protein kinase-like (PK-like) 366 634 IPR011009 -
Prci10g2643 662 Pfam Protein kinase domain 365 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2643 662 Gene3D Transferase(Phosphotransferase) domain 1 438 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2643 Prci-Chr10 34821773 34824870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2643 27 661 Receptor kinase-like Gene Family AT1G68400 66.102 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci10g2643 Pkinase 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2643 - - qsa:O6P43_032719 988.408