Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2636 ATGTCTGCTGCTACAGAACCAGAGGTAGGGTCTAATAATGAAGAAGAAGCTGAGCTCAGGAGAGGCCCTTGGACTCTGGAAGAAGACAGTTTACTCATACACTGTATTGCTCTTCACGGTGAAGGTCGTTGGAACATGTTAGCCAAAAGTTCAGGATTGAAGAGAACTGGAAAGAGTTGCAGATTGAGGTGGCTCAACTATCTGAAACCAGACATCAAGAGAGGGAATTTAACTCCTCAAGAACAACTTTTGATCCTTGAACTCCATTCCAAATGGGGTAACAGGTGGTCGAAAATTGCTCAGCATCTGCCAGGAAGAACAGACAATGAGATCAAGAATTACTGGAGAACAAGAGTTCAGAAACAGGCACGCCAGCTCAACATTGAGACTGGTAGTGACAGATTCATCGATGCTGTTCGATGTTTCTGGATGCCTAGGTTGTTACAAAAGATGGAACAAAACTCTTCATCTTCCTCTTCCTCTGTCACAACCATGAACTCTGAGAATTCTGCAATTAATGTCCCTTCCCTGTCTCCTCCACAAGGAGAATTCGCAGATATCGCAGTAAATCACACAAGCACCACCATCACCAACAACAACAACATTAGTAATCTCAGTTTCCCAGATCATAATTCCCTGCAAGTCCAAGACCAATTTGAAATATCAGAAAACCCGACAGGATCTACTGCTCCTGTTGTGTTCGAGAACTACAACAATAATGTCTGCTTCAATCCAGTTCAAGATCATAGCTTTGGCATGGAAGGGTTAAACTTGGATCCATTTTCAAGAAGTGAAAGTAATTATGGGATTCCCCAGTTTGATTATTGTCAGAGTTCGGAAAGTGAATGGGTTTTGAGCGGCATGGGAGAATATTCTTTGTGGAACTTGGATGAAATGGGACAGTGA 906 0.4272 MSAATEPEVGSNNEEEAELRRGPWTLEEDSLLIHCIALHGEGRWNMLAKSSGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIETGSDRFIDAVRCFWMPRLLQKMEQNSSSSSSSVTTMNSENSAINVPSLSPPQGEFADIAVNHTSTTITNNNNISNLSFPDHNSLQVQDQFEISENPTGSTAPVVFENYNNNVCFNPVQDHSFGMEGLNLDPFSRSESNYGIPQFDYCQSSESEWVLSGMGEYSLWNLDEMGQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2636 301 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Prci10g2636 301 MobiDBLite consensus disorder prediction 1 20 - -
Prci10g2636 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Prci10g2636 301 CDD SANT 78 117 IPR001005 -
Prci10g2636 301 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Prci10g2636 301 FunFam MYB transcription factor 78 141 - -
Prci10g2636 301 Gene3D - 77 119 - -
Prci10g2636 301 CDD SANT 23 68 IPR001005 -
Prci10g2636 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Prci10g2636 301 Gene3D - 18 74 - -
Prci10g2636 301 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Prci10g2636 301 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 204 IPR044676 GO:0003700|GO:0006355|GO:0043565
Prci10g2636 301 MobiDBLite consensus disorder prediction 153 177 - -
Prci10g2636 301 SMART sant 73 121 IPR001005 -
Prci10g2636 301 SMART sant 20 70 IPR001005 -
Prci10g2636 301 FunFam Myb transcription factor 21 73 - -
Prci10g2636 301 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Prci10g2636 301 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2636 Prci-Chr10 34628613 34630137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2636 16 178 MYB Transcription Factor Family AT1G68320 75.460 7.37e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci10g2636 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2636 K09422 - gmx:100775834 359.377