Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2630 ATGAGCAAGATGCAGAAAAATTCCTCATCCAATAATATTCAAGAATTCATGGCTTTGTTCAACGATTCATTCCCGGATCAACAACTTAATATCCCTCCCGTTCACACCAATATTAATCCACAGGCTCTTCACTCATCAATCTCTCCTAATTATGTTCTTCAAGATGCAGAAACGTTGCCTATATCAGAAACCTTACTGGTTCCTTCTCTTCCTCTTGCTGCTGAAAAGAACAAGAACCTGGTTATCAGCAAGAGGAAGAGAAACAGTAACAGGCGTGAGGTTGATGATGAAGAGAAAGAAAAAGACGTCATCCATGTGAGAGCGAAAAGAGGCCAAGCAACTGATAGCCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAGAATCAATGAAAAGTTAAGATGCTTGCAAGAATTAGTCCCAGGGTGCTACAAGACAATGGGTATGGCAGTCATGTTAGATGTGATCATAGATTATGTTCAATCTCTGCAACAACAGATTGAGTTTCTTTCCATGAAGCTTACAGCAGCAACCATGCATTATGATTTCCAATCTTCTGAGTTCAATGTCACCGAACCCTTACAGAGGAATATTAATACTTGTGAAGTCCAAGAGATGGAGAAGATGGGAGAAGAAGGTTATAGGGGGTACCCTTACCGCAATCCTACGTGGCCACTTCATTAA 681 0.4097 MSKMQKNSSSNNIQEFMALFNDSFPDQQLNIPPVHTNINPQALHSSISPNYVLQDAETLPISETLLVPSLPLAAEKNKNLVISKRKRNSNRREVDDEEKEKDVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQELVPGCYKTMGMAVMLDVIIDYVQSLQQQIEFLSMKLTAATMHYDFQSSEFNVTEPLQRNINTCEVQEMEKMGEEGYRGYPYRNPTWPLH 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2630 226 SMART finulus 118 168 IPR011598 GO:0046983
Prci10g2630 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 112 162 IPR011598 GO:0046983
Prci10g2630 226 Pfam Helix-loop-helix DNA-binding domain 116 163 IPR011598 GO:0046983
Prci10g2630 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 110 180 IPR036638 GO:0046983
Prci10g2630 226 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 78 191 IPR024097 GO:0006355
Prci10g2630 226 Gene3D - 107 171 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2630 Prci-Chr10 34606861 34608424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2630 95 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 65.041 2.63e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci10g2630 HLH 2.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2630 - - aprc:113869931 214.927