Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2621 ATGAGAACAGAAGAGAACCCATTAGACCTCAACAATTTGCCAGATGACTACTCTAGGGATGGTAAACAAGTCCTCGAAGACACCTCCTCAGGTTGCAGGAAAAAGAAAAGCGGAGGGAAGGATGGAAAAGAAGAGTGTGGTAAGGTCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAGGCTCTTGGTGGTCACATGAACCGCCATCGCCAAGAAAGGGAAACCGAGACTCTTAACCATGCTCGTCAACTCGTTTTCCGAAACGATCATTCCATAGCCGCCCAGTTAGGGTGCTGCCAACCAGTAGTGGCAGGGAGCTACAACAACAACAACGTAGGAGATCCAACAACGTCTCTGAGATTTCCCAGATACTTGTCTGCTTCTTCATCTTCATCATCACCTTCTCATGCCCCTCATCAGTCATACCTGTACGCCTCGTCCTCACAACCAGTCTCGTCCTTTCCTTCTCACCACCACCACCACCACCCAGTGATCAGCGATTACTATGTGGGTCACGCCCTTCACAATCACAACTACGTGGCAAGCAGTACTGGCGGCGGCGGCGAGTCTGGTTACACCTCCATCGGTGCACCGGTGGGCCATGTGTTCGGTGGCGGGGACGACGGCTCACTGCATATTCATGAGGAGGATGGGTTGAACCCGGGTCGACACAGCTATTCTGCAGTATATCAGCACCGTGCAGATCCTCCTTCGGCGATCAATCGGTTTCAAGACGGATTTTAA 753 0.5126 MRTEENPLDLNNLPDDYSRDGKQVLEDTSSGCRKKKSGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHSIAAQLGCCQPVVAGSYNNNNVGDPTTSLRFPRYLSASSSSSSPSHAPHQSYLYASSSQPVSSFPSHHHHHHPVISDYYVGHALHNHNYVASSTGGGGESGYTSIGAPVGHVFGGGDDGSLHIHEEDGLNPGRHSYSAVYQHRADPPSAINRFQDGF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2621 250 FunFam Zinc finger protein STAMENLESS 1 26 98 - -
Prci10g2621 250 Gene3D Classic Zinc Finger 27 100 - -
Prci10g2621 250 PANTHER ZINC FINGER PROTEIN JAGGED 29 207 IPR045320 GO:0003700
Prci10g2621 250 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
Prci10g2621 250 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Prci10g2621 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 77 IPR013087 -
Prci10g2621 250 MobiDBLite consensus disorder prediction 1 44 - -
Prci10g2621 250 MobiDBLite consensus disorder prediction 15 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2621 Prci-Chr10 34460640 34462962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2621 1 203 C2H2 Transcription Factor Family AT1G13400 44.907 5.93e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2621 - - aprc:113871902 286.189