Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2576 ATGTCTTATTCTGCAATAGGCCTTAATTTCCATTCCTCCTCCTCTCCGCCGGCAACTGCATACACCACCTCACCGGTGATCATAGCTTTCACGCTCGGCATCCTCATATGTTTCATCGTCAGTTTTTGCTTCATCTACTTGTGTCGATGCTGTTTCATGAATTACTTCTTTTCTTGGGCCTTCCATCGTCCCACCGCCGACCATCTCGTTCGCCAGATCCATACCCCAGCCGACGGCGACTCGTCTCCGTTCCGTGGCCTCGACCAGGCGCTACTTCAGATCTTCCCGACATTTCCTTACTCCTCTGTGAAGGAGTTTCAAGGGAAGAATAACAAAAACAACAAAAGCTATAGCCTAGAATGTGCCATTTGCTTGTTGGAATTTGAGGAAGATAGCTTCCTTCGCCTCTTGACCGTTTGCTGCCATGTCTTTCACCAAGAATGCATCGATCTCTGGCTCGAGTCTCACAAGACATGTCCTGTTTGTCGTACAAATCTCGATTCATTATCAAAGGAAAAATCTCATCAGGAAAACCAAACAACAAGATCAGAGCCATTCACAGAGAACAACAATAACGATAACGAGACCCGTATCGATGTAAGCGAAGAAGATGATGATGATGATGAAGATTCTAGAAGAGAAGAGGAAGAAGAAGTTTTTTCTAGGAATCTGCAGCAAGTAGGAGAAGGAGATAAAGCGAAGAGGTTTTCAAGGTCACACTCAACGGGTCATTCCATAGTTGTGATAAAAGGTGGAGAAGAAGAAGAAGAAAGTGATGATGATGATGATGAGAAGAAGAAAGAGGATAAATATATGTTGAAATTACCAGAGCATGTTCAGATAAAACTGATAAGAGGAGGAGGACATAGCCACACAAAGAGTTGTGCCTCTTACAATGAGATGGCCAAATTTAGTAGTAGTAAATGTTATTATGCTGAGGCCGTATCAGGATGCACTACTTCCTCCCAGCCTTTAAGGGTTTGA 984 0.437 MSYSAIGLNFHSSSSPPATAYTTSPVIIAFTLGILICFIVSFCFIYLCRCCFMNYFFSWAFHRPTADHLVRQIHTPADGDSSPFRGLDQALLQIFPTFPYSSVKEFQGKNNKNNKSYSLECAICLLEFEEDSFLRLLTVCCHVFHQECIDLWLESHKTCPVCRTNLDSLSKEKSHQENQTTRSEPFTENNNNDNETRIDVSEEDDDDDEDSRREEEEEVFSRNLQQVGEGDKAKRFSRSHSTGHSIVVIKGGEEEEESDDDDDEKKKEDKYMLKLPEHVQIKLIRGGGHSHTKSCASYNEMAKFSSSKCYYAEAVSGCTTSSQPLRV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2576 327 MobiDBLite consensus disorder prediction 215 238 - -
Prci10g2576 327 MobiDBLite consensus disorder prediction 180 194 - -
Prci10g2576 327 MobiDBLite consensus disorder prediction 198 214 - -
Prci10g2576 327 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Prci10g2576 327 PANTHER RING FINGER DOMAIN-CONTAINING 18 173 - -
Prci10g2576 327 MobiDBLite consensus disorder prediction 170 267 - -
Prci10g2576 327 SMART ring_2 121 162 IPR001841 -
Prci10g2576 327 Pfam Ring finger domain 120 163 IPR001841 -
Prci10g2576 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 169 IPR013083 -
Prci10g2576 327 FunFam E3 ubiquitin-protein ligase ATL6 77 169 - -
Prci10g2576 327 SUPERFAMILY RING/U-box 120 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2576 Prci-Chr10 33726923 33728139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2576 8 285 Rapid Response to Elicitors AT3G05200 35.088 3.36e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2576 - - pcin:129322653 617.846