Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2559 ATGGCCACCGTTGCTGCCGCTCGAGGAATAGGTGTGGGAGTGACGAAGCTTCAAAGACCCAACCACTCCAACCACAACAAGAAGTCGCTCTTTTTGGGTCAAAAACTTCGAAATAAACCCTCCGTTACAGAATCCCATTGCAGTGGAGGAATCACAACACCGAACCCTAAATCGTTCGTGGCCTGCGCATTAGGAGGCGAATGGCTTGATTCGATTCACCACTTGTTTGTGGGCGTCGGGGTTGGGCTTCCTTGCACGGTCATGGAGTGCGGCGATATAATCTACAGAAGCACTCTTCCAAAGTCGAATGGCTTGACGATTACAGCTCCTGGGGTGGTTTTGGCTCTGGGTGCTGTGTCCTACCTCTGGGCTACGCCTGGTGTGGCCCCTGGTTTCTATGACATGTTTGTTCTTGCCTTTGTTGAAAGATTGTTCAGACCTACTTATAAAAAGGATGACTTTGTCCTAGGGAAGAAGTTGGGTGAGGGATCGTTTGGAGTAGTTTACAGGGTTTCATCGACCAAGAAGCCCTCTTCAAAGGAAGGTGACTTGGTCTTGAAGAAGGCTACTGAATATGGCGCAGTGGAAATTTGGATGAATGAGCGTGTTCGAAGAGCTTGTGCAAATAGCTGTGCTGATTATGTTTATGGTTTCCTTGAGAATTCTGGGAAGAAGGGTGGTGAATACTGGCTTATATGGAAGTTTGAAGGGGATGCTACTCTGGCAGACCTAATGCTGAGCAAAGAGTTTCCATATAATGTTGAAACAATGATTCTGGGCAAGGTCCAGGACTTGCCTAAGGGATTGGAGAGAGAAAATAGAATACTTCAAACAATTATGGGGCAGATCTTGTTTGCATTGGATGGTCTTCACTCAACTGGTATCGTGCATAGGGATATTAAGCCCCAGAATATTATTTTCTCTGAAGGATCTCGTACATTCAAGATTATTGATCTTGGTGCTGCAGCAGATTTGCGGGTTGGCATCAACTATATTCCTAACGAGTTTCTGTTGGATCCAAGATATGCTGCCCCAGAGCAGTACATAATGAGCACACAAACTCCCTCTGCACCCTCAGCTCCGGTTGCAACTGCACTTTCCCCGGTCCTATGGCAGTTGAATCTGCCGGACAGATTTGATATCTATAGTGCTGGCCTAATATTTCTTCAAATGGCATTCCCTGGATTACGCTCTGATAATTGTCTCATACAATTTAAACGTCAGTTGAAGAGGTGTGACTATGACTTGGTTGCGTGGAGAAGAAGTGTAGAACCTCGTTGTGGTCCTGAACTAAGGAGAGGCTTTGAGCTTCTGGATTTAGATGGCGGAATAGGGTGGGAGCTTCTGACATCAATGGTCCGTTATAAAGCACGGCAACGACTCAGTGCAAAAGCAGCATTAGCTCATCCCTATTTTGACAGGGAAGGCTTGTTGGCACTATCTTTCATGCAAAATCTAAGACTGCAGCTCTTACGAGCAACGCAGCAGGATTATGGAGAAGCAGCCAAATGGATTATTCAGCTCATGGCAAAATCTGGAACCTCACAAGTTGGAGGATTTACTGAAGCTCAGCTCCAGGAACTAAGAGAAATAAAACCAAAGAAGAATAGCGCACAAAGAAATGCTTTAGCCTCAGCTCTCAAACTTCAGAGGAAAATTATAAAAACGTTGAATGAGAGTATGGATGAGCTTAACCAACGCAGGAAAAGCCTATGGTGGAGCAGATGGATCCCCAGGCAAGAATGA 1746 0.457 MATVAAARGIGVGVTKLQRPNHSNHNKKSLFLGQKLRNKPSVTESHCSGGITTPNPKSFVACALGGEWLDSIHHLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTITAPGVVLALGAVSYLWATPGVAPGFYDMFVLAFVERLFRPTYKKDDFVLGKKLGEGSFGVVYRVSSTKKPSSKEGDLVLKKATEYGAVEIWMNERVRRACANSCADYVYGFLENSGKKGGEYWLIWKFEGDATLADLMLSKEFPYNVETMILGKVQDLPKGLERENRILQTIMGQILFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPNEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRSDNCLIQFKRQLKRCDYDLVAWRRSVEPRCGPELRRGFELLDLDGGIGWELLTSMVRYKARQRLSAKAALAHPYFDREGLLALSFMQNLRLQLLRATQQDYGEAAKWIIQLMAKSGTSQVGGFTEAQLQELREIKPKKNSAQRNALASALKLQRKIIKTLNESMDELNQRRKSLWWSRWIPRQE 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2559 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Prci10g2559 581 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 67 556 - -
Prci10g2559 581 CDD STKc_SNT7_plant 158 472 - -
Prci10g2559 581 Pfam Protein kinase domain 271 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2559 581 Coils Coil 547 567 - -
Prci10g2559 581 SUPERFAMILY Protein kinase-like (PK-like) 138 474 IPR011009 -
Prci10g2559 581 Gene3D Phosphorylase Kinase; domain 1 140 234 - -
Prci10g2559 581 ProSiteProfiles Protein kinase domain profile. 154 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2559 581 Gene3D Transferase(Phosphotransferase) domain 1 262 476 - -
Prci10g2559 581 FunFam Serine/threonine-protein kinase STN7, chloroplastic 263 477 - -
Prci10g2559 581 SMART serkin_6 154 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2559 581 ProSitePatterns Protein kinases ATP-binding region signature. 160 187 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2559 Prci-Chr10 33430927 33435868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2559 272 473 Core Cell Cycle Gene Families AT2G38620 31.455 3.20e-17 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Prci10g2559 Pkinase 2.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2559 - - qsa:O6P43_032791 953.355