Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2540 ATGATGCCCCTTCATGATCAAGAAACTACCACAGTCGCTACTGTCACGCCAAACATGCAGAGTCAGACCGTCGTGAGCCGGCCGGAGAATGGCTCAGTCCACGCCGAGCCGTCCGGTTTGGGCCGTCACGGCGGAGAACCTGGTCTTGATACCACCATTTCCGACCATGATCACCACCCAACAACACCAAGAGTTTCGGCTCTACACCAATCCTTGCGTCCTGTTACGCTCAAATTTGAAGACTTCTCTTACAGTGTAACAATCGAAAGCAAGAAGAATGCTTGTGTCTGTGTTTCTTCTCAAAATCAGAAGGTGACGAGGACGATACTCAACGGCGTGACAGGGATTGTCCGGCCCGGTGAGCTAATGGCAATGCTGGGTCCGTCCGGTAGCGGGAAGACCACGCTGCTGACTGCCCTCGCCGGCCGGCTAACCGGGAAAGTCTCTGGCTCCATAACATACAATGGCCAACCCTTCTCTAGCTCCATGAAGCGCAAGACCGGATTTGTCACACAAGACGACGTTCTCTATCCTCACCTCACTGTCCTTGAGACGCTCACTTTTGCTGCTTTGCTAAGACTTCCCAAGAGCCTCACCAGAAAAGAGAAAATGGAGCAGGCCGAGACCATCATGGCGGAGCTCGGGCTCACCAGGTGCCGAAACAGCCCCATCGGCGGAGGAGCCAGCTTGGTTAGGGGCATTTCCGGCGGAGAACGAAAACGGGTCAGTATCGGCCAGGAGATGCTTGTGAACCCGAGTCTGTTATTGCTGGACGAGCCGACCTCGGGGCTGGACTCGACGACGGCACAGCGCATCGTGGTTATGCTCCGGGGGCTGGCTCGTGGCGGCCGGACTGTGGTGACGACCATTCATCAGCCTTCGAGTCGGTTGTATAGAATGTTCGATAAGGTGGTTGTGTTGTCGGATGGGTACCCGATTTACAGCGGGAAAGCGGTTCGGGTCATGGAGTATCTTGGGTCCATCGGGTTTGTGCCCGCTTTCAACTTTATTAACCCGGCAGATTTTCTACTTGACTTGGCTAATGGCGTAGTTGCTGATGTCAAACAGGATGGTCAAACAGATTTACATGGAACACTAGACCACCATGAGGATCAAGCTTCAGTTAAACAGTCCCTAGTTTCATCCTACAAGAAGATTTTATACCCTTCTCTGAAACAAGAGATTCAGCAAAGCAATAGAGAGCTAGCTGCTTTCACATCAGGAACACGAAGAAGTTCAGAGAATCAATGGAACACAAGCTGGTGGGAGCAGTTCAGGGTGCTTCTGAAGAGAGGCTTAAAAGAGAGGAGGCATGAATCATATTCAGGCTTAAGGATTTTCCAAGTCTTGTCTGTCTCTTTTCTCTCTGGACTTCTGTGGTGGCATTCTGATCCCTCAAACATACAAGATCAGCTGGGCCTGCTCTTCTTCTTCTCAATCTTCTGGGGATTCTTCCCTCTATTCAATGCAATATTAGCATTCCCTCTAGAGAGACCAATGCTATCAAAAGAGAAATCATCAGGAATGTACCATCTCTCCTCTTACTACATGGCCAGAATGATTGGAGACTTGCCAATGGAACTCGTGCTTCCCACTATTTTCACAACAATCACCTATTGGATGGGAGGCCTCAAGCCTTCACTTGTCACCTTTGTGTTAACCCTCTTGATCATCCTCTTCAATGTCCTTGTGTCCCAAGGCATAGGCCTTGCCCTTGGGGCCATCCTAATGGATGTGAAGCAAGCCACAACTCTGGCTTCTGTGACCATGCTCGTGTTTTTGCTAGCTGGTGGTTATTACATTCAGAAAATGCCTTCTTTCATAGCTTGGCTTAAGTACTTCTCATTCAGTCACTATTGCTATGAGCTTCTGGTGGGAGTTCAGTATTCAAAAGATCAAGTCTATGACTGTGGCCATGGGTTGCATTGTAGGGTAGTGGATTTTCCTGCCATAAGGTGTTTGGATATTGAAAACCTGTGGGGGGATGTGGCTGCCTTGGCTGTTATGTTTGTTGGATACAGAATTGTGGCCTATCTAGCTTTAAGGATGAGGTAG 2055 0.4964 MMPLHDQETTTVATVTPNMQSQTVVSRPENGSVHAEPSGLGRHGGEPGLDTTISDHDHHPTTPRVSALHQSLRPVTLKFEDFSYSVTIESKKNACVCVSSQNQKVTRTILNGVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLTGKVSGSITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTFAALLRLPKSLTRKEKMEQAETIMAELGLTRCRNSPIGGGASLVRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVVMLRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGKAVRVMEYLGSIGFVPAFNFINPADFLLDLANGVVADVKQDGQTDLHGTLDHHEDQASVKQSLVSSYKKILYPSLKQEIQQSNRELAAFTSGTRRSSENQWNTSWWEQFRVLLKRGLKERRHESYSGLRIFQVLSVSFLSGLLWWHSDPSNIQDQLGLLFFFSIFWGFFPLFNAILAFPLERPMLSKEKSSGMYHLSSYYMARMIGDLPMELVLPTIFTTITYWMGGLKPSLVTFVLTLLIILFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYELLVGVQYSKDQVYDCGHGLHCRVVDFPAIRCLDIENLWGDVAALAVMFVGYRIVAYLALRMR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2540 684 MobiDBLite consensus disorder prediction 49 63 - -
Prci10g2540 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 334 IPR003439 GO:0005524
Prci10g2540 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 678 - -
Prci10g2540 684 MobiDBLite consensus disorder prediction 7 29 - -
Prci10g2540 684 Pfam ABC-2 type transporter 291 356 IPR043926 GO:0140359
Prci10g2540 684 Pfam ABC-2 type transporter 423 629 IPR013525 GO:0016020|GO:0140359
Prci10g2540 684 Gene3D - 95 328 IPR027417 -
Prci10g2540 684 FunFam ABC transporter G family member 22 97 328 - -
Prci10g2540 684 MobiDBLite consensus disorder prediction 1 68 - -
Prci10g2540 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 326 IPR027417 -
Prci10g2540 684 ProSitePatterns ABC transporters family signature. 234 248 IPR017871 GO:0005524|GO:0016887
Prci10g2540 684 Pfam ABC transporter 110 262 IPR003439 GO:0005524
Prci10g2540 684 CDD ABCG_EPDR 74 316 - -
Prci10g2540 684 SMART AAA_5 119 312 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2540 Prci-Chr10 33052261 33056738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2540 57 310 Calmodulin-binding Proteins AT2G36910 30.712 2.04e-14 75.5