LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g2525	ATGTCGGTGGCGTCACCAGCTCCTGCGGCCGCCACAGGCCCACCATCACCACCAACACCCTCCACCAACAGTAGTGCAGTGCCGCCCCCCACCGCTCCGCCACCACAATCCTCTTCACCGGCACCACCAGGCAATCCCACTTCGCCGCCGCCTTCGGCACCTCCGCCATCTTCAACCCCTCCCACACAGTCTCCACCTCCGGTGACTCCGTCAGCACCTCCTCCTGTTGTGCCATCGCCTCCGCCGGCACAGTCACCGCCACCTCAGGCATCACCACCCCCTTCATCTGTCACTACACCCCCATTGTCACCTTCTTCAGCTCCTCCTCCTCCTCCACAATCAGTTGCACCTGCGTTACAACCACCACCTCCGCCTAATGCTACCCCGCCTACTTTTCCTGTACTTTCACCTCCACCACCACAAGCACAGGCTCCACCGCCATCTAATTCATCCCAACGACCGCAATCACCTCCTCCAGCAAATTCATCCCAACCACCGCCATCTAACCCATCTCCGGTGCCTTCGCCGCCTACACCATCGGCAAACCCGCCAAGAAACTCACCTCCACCTCGTACACCATCGTCAAACCCTCCCCAAAACTCCCCTCCGCCGCCTTCACCATCGTCAAAACCTCCAGCAAACTCACCACCACCGACATCAAGCCCCCCGCGAAATTCAACTTCACCGCCATCATCTGTGCCACCCCGAGGGACATCTCCATCACCAGCATCAGCACCGCCTGTAAATTCACCTACCCCGGCGGCTAGCCCACCTAGTTCTCAATCAAGTCCATCTCCCTCAAAGTCTACCCCAAATTCATCTCCGCCGCCCCCCATAATTCGAATGGCTCCACCTCCGTCCTCACTTTTGTCACCACCGACTTCTCAAAATTCCTCCCCGCCATCAGAAAGTGGAACAGAGAGTTCAAACGCCAGTCCAAGTGGTGGCAATACTGGTGTTGCAGTGGCTATTGGTGTAGCGGGGGGAATTATAGTGATAACCTTAATTGGAATTCTTATCTGGTACCTGATAAGGAGGCGAAAGAAACGGGGGCCTGAGAGTGGTGGTTATATCATGCCATCCACTTCTGGCTCACTACCCGAGTCAGATTCGTCGTTTTTTAAGACACATTCTTCAGCTCCTTTTGTACAAAGTGGTTCTGGTAGTGACACTGTGTACTCACCATCTGAGCCGGGGGGACTAGGCAACTCGAGGGCATGGTTTACGTATGAAGAACTAGTCAAAGCTACAAATGGTTTTGCGCCTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATGCCTACCTGACGGGAGAGAGGTAGCAGTCAAAGCGCTAAAAATTGGTGGAGGACAGGGTGAGAGGGAATTCAAAGCTGAAGTGGAGATTATTAGTCGCATTCATCATCGCCATTTAGTCTCTTTGGTGGGATACTGCATTTTAGACAGCAGAAGGCTGCTCGTCTATGACTATGTCCCCAACAAAACCCTCTATCATCATCTTCATGGGGAAGGTATGCCAGTGGTGAGCTGGGAAAAACGTGTGAGAATTGCTGCTGGTGCAGCTCGAGGAATTGCTTATCTCCATGAAGATTGCAATCCTCGGATTATTCATAGGGATATCAAGTCCTCAAACATTCTTTTAGATTACAACTTTGATGCTCAAGTCTCAGATTTCGGGCTAGCCAAATTAACCCTTGATGCAGATTCACACATAAGCACTCGTGTCATGGGAACATTTGGATATGTTGCACCTGAATATGCATCAAGTGGCAGATTGACTGAGAAGTCTGATGTATTTTCTTTTGGGGTTGTACTTCTGGAGCTCATTACTGGACGGAAGCCTGTAGATGCTTCTCAACCGATCGGGGATGAGAGCCTAGTTGAATGGGCTCGACCTTTGCTGAGTCATGCAATTGAAAACAAGGACTTCGAAGGATTAACAGATCCTAAGCTTGAAAAGAACTATGTTGAAAGTGAGATGTTAAGCATGATTGAAATTGCTGCAACTTGTGTGCGACATTCGGCTGCCAAAAGACCTCGAATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGTAAATTCAGATTTAAACAACGGGATGAGGCCAGGGGAAAGCGAGGCATTTAACTCTGCACAACAATCTGCAGAAATAAGAATGTTTCGGAGGATGGCATTTGGGAGTCAAGATTACAGCACAGACTTTTTTAGTCAGACAAGTTTGAATTCAACATAG	2247	0.5029	MSVASPAPAAATGPPSPPTPSTNSSAVPPPTAPPPQSSSPAPPGNPTSPPPSAPPPSSTPPTQSPPPVTPSAPPPVVPSPPPAQSPPPQASPPPSSVTTPPLSPSSAPPPPPQSVAPALQPPPPPNATPPTFPVLSPPPPQAQAPPPSNSSQRPQSPPPANSSQPPPSNPSPVPSPPTPSANPPRNSPPPRTPSSNPPQNSPPPPSPSSKPPANSPPPTSSPPRNSTSPPSSVPPRGTSPSPASAPPVNSPTPAASPPSSQSSPSPSKSTPNSSPPPPIIRMAPPPSSLLSPPTSQNSSPPSESGTESSNASPSGGNTGVAVAIGVAGGIIVITLIGILIWYLIRRRKKRGPESGGYIMPSTSGSLPESDSSFFKTHSSAPFVQSGSGSDTVYSPSEPGGLGNSRAWFTYEELVKATNGFAPQNLLGEGGFGSVYKGCLPDGREVAVKALKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCILDSRRLLVYDYVPNKTLYHHLHGEGMPVVSWEKRVRIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFDAQVSDFGLAKLTLDADSHISTRVMGTFGYVAPEYASSGRLTEKSDVFSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLSHAIENKDFEGLTDPKLEKNYVESEMLSMIEIAATCVRHSAAKRPRMGQVVRAFDSLVNSDLNNGMRPGESEAFNSAQQSAEIRMFRRMAFGSQDYSTDFFSQTSLNST	748

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g2525	748	ProSiteProfiles	Protein kinase domain profile.	420	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g2525	748	MobiDBLite	consensus disorder prediction	351	372	-	-
	Prci10g2525	748	CDD	STKc_IRAK	426	696	-	-
	Prci10g2525	748	Gene3D	Transferase(Phosphotransferase) domain 1	496	714	-	-
	Prci10g2525	748	FunFam	proline-rich receptor-like protein kinase PERK8	496	707	-	-
	Prci10g2525	748	Gene3D	Phosphorylase Kinase; domain 1	398	495	-	-
	Prci10g2525	748	Pfam	Protein tyrosine and serine/threonine kinase	424	692	IPR001245	GO:0004672\|GO:0006468
	Prci10g2525	748	SMART	serkin_6	420	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci10g2525	748	CDD	TM_EGFR-like	319	350	-	-
	Prci10g2525	748	MobiDBLite	consensus disorder prediction	1	315	-	-
	Prci10g2525	748	MobiDBLite	consensus disorder prediction	292	315	-	-
	Prci10g2525	748	ProSitePatterns	Protein kinases ATP-binding region signature.	426	448	IPR017441	GO:0005524
	Prci10g2525	748	SUPERFAMILY	Protein kinase-like (PK-like)	398	691	IPR011009	-
	Prci10g2525	748	MobiDBLite	consensus disorder prediction	358	372	-	-
	Prci10g2525	748	FunFam	Proline-rich receptor-like protein kinase PERK8	392	495	-	-
	Prci10g2525	748	MobiDBLite	consensus disorder prediction	10	260	-	-
	Prci10g2525	748	MobiDBLite	consensus disorder prediction	269	291	-	-
	Prci10g2525	748	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	540	552	IPR008271	GO:0004672\|GO:0006468
	Prci10g2525	748	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	329	728	IPR047117	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g2525	Prci-Chr10	32863164	32869291	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g2525	193	697	Trihelix Transcription Factor Family	AT1G68690	58.317	0.0	540

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Prci10g2525		Pkinase	4.1e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g2525	-		-	gmx:100794393	695.271