Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2519 ATGCAGCATGCTCTTCAACTACATCAAGCTAACTTCGTCCTACTTCAAATGGGTTTTAGAGTTCCCTCTCTACCACCCATTTTACAGCCCTTGTGTTCTTCATCATCATCATCAACCTCTTCAAGATTTTCATCAGATCCTTACAGAGAAGAACAAGTGGAGATATGGCGTCGTCGTGACGAAGAAGAAGTGGATTGTGCTGTCTGTCTGAGCCAGATTGGTGAAGGAGACGAACTTAGAGTGCTGAGGTGTGAGCATGCTTTTCATAGGCTTTGTTTGAATCAATGGGTGGGTTTGAGGAATTATAATTGTCCTCTTTTCAGGGATTTTCTGGGTTCTGGGAATATGGTTGTTAATGGTGTCAAGTTTCTTGCTTTTTCTGGTGATTCTGAACGTGACAACTGGTGGCTACGATTTTTCATCCTACTATGCAGCATGCTCTTCAACTACATCAAGCTAACTTCGTCCTACTTCAAATGGGTTTTAGAGTTCCCTCTCTACCAACATTTTGCAGCCTTCGTGTTCATCATCATCATCATCATCATCAACCTCTTCAAGAGTTTCATCAGATCCTTACAGAAGAAGAACAAGTGGAGTCAGGAGATATGGCGTCGTCGTGACGAAGAAGAAGTGGATTGTGCAGCGTGTCTGAGCAAGATTGATTAA 666 0.4264 MQHALQLHQANFVLLQMGFRVPSLPPILQPLCSSSSSSTSSRFSSDPYREEQVEIWRRRDEEEVDCAVCLSQIGEGDELRVLRCEHAFHRLCLNQWVGLRNYNCPLFRDFLGSGNMVVNGVKFLAFSGDSERDNWWLRFFILLCSMLFNYIKLTSSYFKWVLEFPLYQHFAAFVFIIIIIIINLFKSFIRSLQKKNKWSQEIWRRRDEEEVDCAACLSKID 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2519 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 111 IPR013083 -
Prci10g2519 221 PANTHER - 59 120 - -
Prci10g2519 221 Pfam RING-like zinc finger 65 93 IPR001841 -
Prci10g2519 221 ProSiteProfiles Zinc finger RING-type profile. 66 108 IPR001841 -
Prci10g2519 221 SMART ring_2 66 107 IPR001841 -
Prci10g2519 221 SUPERFAMILY RING/U-box 52 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2519 Prci-Chr10 32777180 32784599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2519 65 117 C3H Transcription Factor Family AT1G15100 49.057 1.17e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2519 - K16282 pcin:129321643 413.69