Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2479 ATGATCAGCCACAGCCTAATCTCGCAAGACTTCAACAACATCTTCCTTCCCCACAACGAAATTATCCAGAACCTTAACGTAAATACACTCTCAGCTGCAACAAATCATCATCATCATCATCAAGAACTTGTTAACGTTGTTTTTCCTTCTTCGTCAACCTCGGATGAAGCCGAGGAGAAGAAGCAGAGGCGAATGGTATCGAACAGAGAATCGGCTCGAAGGTCGAGGATGAGGAAGAAGAGGCACATGGAGGTGCTGAATTGGGTGATGATCAGACTCAGAACGGAGAACCAGGAGCTTGTTCAGAGACTGAAACATGTGTTAGAGTCACATGATAGGGTTCTTCAGGAGAATGCTAAGCTTAAAGAAGAAGCTTCCCATCTTCGCCAAATGCTTGAGAGCTCTTCCAATTTGCAATCGCCTCCATAG 429 0.4522 MISHSLISQDFNNIFLPHNEIIQNLNVNTLSAATNHHHHHQELVNVVFPSSSTSDEAEEKKQRRMVSNRESARRSRMRKKRHMEVLNWVMIRLRTENQELVQRLKHVLESHDRVLQENAKLKEEASHLRQMLESSSNLQSPP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2479 142 MobiDBLite consensus disorder prediction 54 72 - -
Prci10g2479 142 Coils Coil 104 138 - -
Prci10g2479 142 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 20 135 IPR044521 -
Prci10g2479 142 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
Prci10g2479 142 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
Prci10g2479 142 Gene3D - 58 112 - -
Prci10g2479 142 Pfam Basic region leucine zipper 58 105 IPR004827 GO:0003700|GO:0006355
Prci10g2479 142 CDD bZIP_plant_GBF1 61 112 IPR045314 GO:0003700|GO:0006355
Prci10g2479 142 MobiDBLite consensus disorder prediction 48 79 - -
Prci10g2479 142 SUPERFAMILY Leucine zipper domain 60 109 IPR046347 GO:0003700|GO:0006355
Prci10g2479 142 FunFam BZIP transcription factor 58 109 - -
Prci10g2479 142 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 121 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2479 Prci-Chr10 32386651 32387079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2479 52 141 bZIP Transcription Factor Family AT3G30530 55.000 1.64e-26 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci10g2479 bZIP_2 1.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2479 - - pcin:129322570 282.722