Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2478 ATGGAATGTGAATATTATGTTATTCGTTACATGTATGAGATAGTTCAAGTTGGGAGTACTGAAAGATTACAAGAGATCCACATGATCAGCCACAGCCTAATCTCGCGAGACTTCAAAAACATCTTCCTTCCCCACAACGAAATTATCCAGAACCTTAATGTAAATACACTCTCAGCTGCAACAAATCATCATCATCATCATCAAGAAGAACTTGTTAACGTTGTTGTTCCTTCTTCGTCAACCTCGGATGAAGCCGAGGAGAAGAAGCAGAGGCGAATGGTATCGAATAGAGAGTCGGCTCGAAGGTCGAGGATGAGGAAGAAGAGGCACATGGAGGTGCTGAATTGGGTGATGATCAGACTCAGAACGGAGAACCAGGAGCTTGTTCAGAGACTGAAACATGTATTAGAGTCACATGATAGGGTTCTTCAGGAGAATGCTAAGCTTAAAGAAGAAGCTTCCCATCTTCGCCAAATGCTTGAGAGCTCTTCCAATTTGCAATCGCCTCCATAG 513 0.4308 MECEYYVIRYMYEIVQVGSTERLQEIHMISHSLISRDFKNIFLPHNEIIQNLNVNTLSAATNHHHHHQEELVNVVVPSSSTSDEAEEKKQRRMVSNRESARRSRMRKKRHMEVLNWVMIRLRTENQELVQRLKHVLESHDRVLQENAKLKEEASHLRQMLESSSNLQSPP 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2478 170 Coils Coil 132 166 - -
Prci10g2478 170 MobiDBLite consensus disorder prediction 82 100 - -
Prci10g2478 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Prci10g2478 170 Pfam Basic region leucine zipper 86 133 IPR004827 GO:0003700|GO:0006355
Prci10g2478 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
Prci10g2478 170 CDD bZIP_plant_GBF1 89 140 IPR045314 GO:0003700|GO:0006355
Prci10g2478 170 MobiDBLite consensus disorder prediction 77 106 - -
Prci10g2478 170 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 34 163 IPR044521 -
Prci10g2478 170 SUPERFAMILY Leucine zipper domain 88 137 IPR046347 GO:0003700|GO:0006355
Prci10g2478 170 Gene3D - 86 141 - -
Prci10g2478 170 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Prci10g2478 170 FunFam BZIP transcription factor 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2478 Prci-Chr10 32354178 32360880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2478 80 169 bZIP Transcription Factor Family AT3G30530 55.000 3.90e-26 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci10g2478 bZIP_2 1.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2478 - - pcin:129321559 338.576