Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2477 ATGATCCCTACTAAGATCAGAGGAACATCAGACAACCCATTCTTAACCCCACAAAACATCACCACTTTTCTTCCCAACAACCTTTTCTCAAACTTCGACATCACCAGCCTCCTTGGGTCCACCCATCATCATCATCTTCTGCTGAGTGAGCTTAATAATAATCTTGTTCCTTCTTCTTCAACCTCCGATGAAGCTGAGGAGAAGCAGACAAGCATGATCGATGAGAGGAAGCAGAGACGAATGATATCCAACAGAGAGTCAGCTCGAAGGTCGAGGATGAGGAAACAGAGACACATAGACGAGCTTTGGTCGCAGGTTGTCAGGCTCAGGACAGAGAACCATAACCTTGTTCATAGACTCAACCACGTGTCTGAGTCCCATGATAGGGTTCTTCAGGAGAATGCTAAGCTAAGAGAAGAAGCTTCTGATCTTCGCCAAATGGTCGCAGATTTGCAGATTGGCTCTCCTTTTGCCAACACCCTCGCGGATTTTGATGACTTCTCAGATTTCTAG 513 0.46 MIPTKIRGTSDNPFLTPQNITTFLPNNLFSNFDITSLLGSTHHHHLLLSELNNNLVPSSSTSDEAEEKQTSMIDERKQRRMISNRESARRSRMRKQRHIDELWSQVVRLRTENHNLVHRLNHVSESHDRVLQENAKLREEASDLRQMVADLQIGSPFANTLADFDDFSDF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2477 170 Coils Coil 120 154 - -
Prci10g2477 170 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Prci10g2477 170 FunFam BZIP transcription factor 74 125 - -
Prci10g2477 170 MobiDBLite consensus disorder prediction 67 93 - -
Prci10g2477 170 Gene3D - 74 129 - -
Prci10g2477 170 SUPERFAMILY Leucine zipper domain 76 126 IPR046347 GO:0003700|GO:0006355
Prci10g2477 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Prci10g2477 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 137 IPR004827 GO:0003700|GO:0006355
Prci10g2477 170 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 31 159 IPR044521 -
Prci10g2477 170 Pfam bZIP transcription factor 76 134 IPR004827 GO:0003700|GO:0006355
Prci10g2477 170 CDD bZIP_plant_GBF1 77 128 IPR045314 GO:0003700|GO:0006355
Prci10g2477 170 MobiDBLite consensus disorder prediction 56 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2477 Prci-Chr10 32333696 32334532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2477 30 158 bZIP Transcription Factor Family AT3G30530 58.993 5.92e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci10g2477 bZIP_1 4.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2477 - - pcin:129284626 305.834