Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2472 ATGGCTCAAGATACTTCCAGCACAGATTCAAATCATAAGCGCCAAGGTCTCTTGAAAGATCAAGTTCGTTTGGTTAAAAGGAAAGACTCTGATCGCTTTGAGGTTGTTCCAATCCAGGATCTTCTATCCTTTGACAAGGGTTTCTTTATAGTCATCCGTGCTTGCCAACTGTTAGCCCAGAAAAATGATGGAATGATATTGGTAGGTTTGGCCGGTCCTTCGGGGGCTGGTAAGACTATATTCACAGAAAAAATACTCAACTTCATGCCTGGCATTGCCGTCATTTCAATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGGAACTTTGATGATCCACGCTTAACAGACTATGATACTTTGCTCCAGAATGTCCATGATTTGAAGGCAGGAAAATCAGTTGAGGTTCCAATCTATGATTTTAAGTCCAGTTCACGCACAGGATACAGAACAGTTGAAGTCCCTAGCTCCCGCATTGTGATTATAGAGGGCATCTATGCATTGAGCGAGAAGTTGCGACCCCTAGTTGACCTTCGAGTATCTGTCACGGGTGGAGTTCACTTGGACCTTGTCAAACGAGTTATTCGTGACATACAACGTGCTGGCCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATACCCAATGTACAAGGCCTTTATTGAGCCAGATCTTCAGACAGCACATATCAAAATTGTCAACAAGTTCAATCCATTTACTGGTTTTCAAAGTCCTACCTACATATTAAAGTCAGCAAGGAAAGTAACAGTTGATAAAATTAAAGCTGTTCTCTCTGAAGATTATAAGGAAACAACGGAGCAGACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAAACTTGCCAATCGTACCTACGGATGCGGAATAAGGATGGGAAATACTGTCTGATGTTTGAGGAATGGGTAACAGATAATCCTTTTGTTATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTGATGGCCTTGGGATACACGATTGCTACCATCCTTAAAAGGGACAGCCATGTATACTCTGATGATAGGATTTGTGTGAAACTTGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTGCATGGAAGAGATCGCATGGTGGTAAAATGTGTGGCAGAGCAGCTGGGTCTGGATGGCTCTTACATTCCTCGTACTTACATCGAGCAAATTCAACTTGAAAAGCTTGTAAATGAAGTTATGGCCTTGCCAGATGATTTGAAGGCAAAGCTTAGCTTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTCGAGCCTCTGCAGACAGGGTCGCCACGAGAAATAAGCATATCAGAAGCTTGTCGCAATCATATACAAATCAAAGGGACAAGAATCTAGCCAAACTTGCAATATATGCTTCCAAGAATCGTGGGTTTAGTGAAAGAAATCAGGATTTGCCAACACCACCATCAAACCAGGTTCTTAGAGCTTGGCAGGCAACCATCACTCAGCTTTTCGAACAAATATCTGCTCTTAATGATAGAATGGACGATTTTACAAATCGTATTGAGGAGTTGAACTCAAAGTTAGCCATGAAGAAAAATTCTCTCAGCCAGCAAAATATGTCCCTCCAAGCTGAAGCCGGCAATGGTTCTGCTCCTACCTCTTACTTCCTCACGAGTCTGGGCAATGGCTCCTTAACTGGATCCATTATGCCAAATTCCTCATCTTCATTGCAATCAGCCACGGAGCCACCTTTAAGTGAAGAGGTATTGCAAGGAGCCAGCGTCAGATGA 1815 0.4248 MAQDTSSTDSNHKRQGLLKDQVRLVKRKDSDRFEVVPIQDLLSFDKGFFIVIRACQLLAQKNDGMILVGLAGPSGAGKTIFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKSVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLVDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIVNKFNPFTGFQSPTYILKSARKVTVDKIKAVLSEDYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYCLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRDSHVYSDDRICVKLDWLEQLNRHYVQVHGRDRMVVKCVAEQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKAKLSLDEDLVSSPKEALSRASADRVATRNKHIRSLSQSYTNQRDKNLAKLAIYASKNRGFSERNQDLPTPPSNQVLRAWQATITQLFEQISALNDRMDDFTNRIEELNSKLAMKKNSLSQQNMSLQAEAGNGSAPTSYFLTSLGNGSLTGSIMPNSSSSLQSATEPPLSEEVLQGASVR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2472 604 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Prci10g2472 604 MobiDBLite consensus disorder prediction 575 593 - -
Prci10g2472 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 236 IPR027417 -
Prci10g2472 604 Gene3D - 253 413 - -
Prci10g2472 604 Gene3D - 66 245 IPR027417 -
Prci10g2472 604 ProSiteProfiles CYTH domain profile. 252 410 IPR023577 -
Prci10g2472 604 PANTHER URIDINE KINASE 30 423 - -
Prci10g2472 604 MobiDBLite consensus disorder prediction 575 604 - -
Prci10g2472 604 Coils Coil 501 553 - -
Prci10g2472 604 PRINTS Uridine kinase signature 65 82 - -
Prci10g2472 604 PRINTS Uridine kinase signature 224 237 - -
Prci10g2472 604 PRINTS Uridine kinase signature 132 147 - -
Prci10g2472 604 PRINTS Uridine kinase signature 188 198 - -
Prci10g2472 604 CDD UMPK_like 67 239 - -
Prci10g2472 604 SUPERFAMILY CYTH-like phosphatases 260 407 IPR033469 -
Prci10g2472 604 Pfam CYTH domain 268 404 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2472 Prci-Chr10 32229974 32238442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2472 53 236 PRT Gene Family AT1G55810 27.835 2.16e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2472 K00876 - qsa:O6P43_032837 993.416