Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2468 ATGGCTCAAGATACTTCCAGCACAGATTCAAATCATAAGCGCCAAGGTCTCTTGAAAGATCAAGTTCGTTTGGTTAAAAGGAAAGACTCTGATCGCTTTGAGGTTGTTCCAATCCAGGATCTTCTATCCTTTGACAAGGGTTTCTTTATAGTCATCCGTGCTTGCCAACTGTTAGCCCAGAAAAATGATGGAATGATATTGGTAGGTTTGGCCGGTCCTTCGGGGGCTGGTAAGACTATATTCACAGAAAAAATACTCAACTTCATGCCTGGCATTGCCGTCATTTCAATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGGAACTTTGATGATCCACGCTTAACAGACTATGATACTTTGCTCCAGAATGTCCATGATTTGAAGGCAGGAAAATCAGTTGAGGTTCCAATCTATGATTTTAAGTCCAGTTCACGCACAGGATACAGAACAGTTGAAGTCCCTAGCTCCCGCATTGTGATTATAGAGGGCATCTATGCATTGAGCGAGAAGTTGCGACCCCTAGTTGACCTTCGAGTATCTGTCACGGGTGGAGTTCACTTGGACCTTGTCAAACGAGTTATTCGTGACATACAACGTGCTGGCCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATACCCAATGTACAAGGCCTTTATTGAGCCAGATCTTCAGACAGCACATATCAAAATTGTCAACAAGTTCAATCCATTTACTGGTTTTCAAAGTCCTACCTACATATTAAAGTCAGCAAGGAAAGTAACAGTTGATAAAATTAAAGCTGTTCTCTCTGAAGATTATAAGGAAACAACGGAGCAGACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAAACTTGCCAATCGTACCTACGGATGCGGAATAAGGATGGGAAATACTGTCTGATGTTTGAGGAATGGGTAACAGATAATCCTTTTGTTATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTGATGGCCTTGGGATACACGATTGCTACCATCCTTAAAAGGGACAGCCATGTATACTCTGATGATAGGATTTGTGTGAAACTTGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTGCATGGAAGAGATCGCATGGTGGTAAAATGTGTGGCAGAGCAGCTGGGTCTGGATGGCTCTTACATTCCTCGTACTTACATCGAGCAAATTCAACTTGAAAAGCTTGTAAATGAAGTTATGGCCTTGCCAGATGATTTGAAGGCAAAGCTTAGCTTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTCGAGCCTCTGCAGACAGGGTCGCCACGAGAAATAAGCATATCAGAAGCTTGTCGCAATCATATACAAATCAAAGGGACAAGAATCTAGCCAAACTTGCAATATATGCTTCCAAGAATCGTGGGTTTAGTGAAAGAAATCAGGATTTGCCAACACCACCATCAAACCAGGCAACCATCACTCAGCTTTTCGAACAAATATCTGCTCTTAATGATAGAATGGACGATTTTACAAATCGTATTGAGGAGTTGAACTCAAAGTTAGCCATGAAGAAAAATTCTCTCAGCCAGCAAAATATGTCCCTCCAAGCTGAAGCCGGCAATGGTTCTGCTCCTACCTCTTACTTCCTCACGAGTCTGGGCAATGGCTCCTTAACTGGATCCATTATGCCAAATTCCTCATCTTCATTGCAATCAGCCACGGAGCCACCTTTAAGTGAAGAGCTATCAGGTATTGCAAGGAGCCAGCGTCAGATGATACACCAACTGGACAATCTGAATAATCTCCTTCAGGGAAGCAGGGTAGACAAATGTAAGCAAACAAGAACTTGCAAGAAAACCGTGGCTGCTGCTGAATCAGAGTCCCGTGGTGTGCGTGTTATGATGACAGTGGCTATTGGGATTCTTGGGGTCTTTTTCATGAAGGGTTTGTTGACCAGAAACTGA 1992 0.4267 MAQDTSSTDSNHKRQGLLKDQVRLVKRKDSDRFEVVPIQDLLSFDKGFFIVIRACQLLAQKNDGMILVGLAGPSGAGKTIFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKSVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLVDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIVNKFNPFTGFQSPTYILKSARKVTVDKIKAVLSEDYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYCLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRDSHVYSDDRICVKLDWLEQLNRHYVQVHGRDRMVVKCVAEQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKAKLSLDEDLVSSPKEALSRASADRVATRNKHIRSLSQSYTNQRDKNLAKLAIYASKNRGFSERNQDLPTPPSNQATITQLFEQISALNDRMDDFTNRIEELNSKLAMKKNSLSQQNMSLQAEAGNGSAPTSYFLTSLGNGSLTGSIMPNSSSSLQSATEPPLSEELSGIARSQRQMIHQLDNLNNLLQGSRVDKCKQTRTCKKTVAAAESESRGVRVMMTVAIGILGVFFMKGLLTRN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2468 663 Coils Coil 502 547 - -
Prci10g2468 663 Gene3D - 66 245 IPR027417 -
Prci10g2468 663 ProSiteProfiles CYTH domain profile. 252 410 IPR023577 -
Prci10g2468 663 PRINTS Uridine kinase signature 132 147 - -
Prci10g2468 663 PRINTS Uridine kinase signature 224 237 - -
Prci10g2468 663 PRINTS Uridine kinase signature 188 198 - -
Prci10g2468 663 PRINTS Uridine kinase signature 65 82 - -
Prci10g2468 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 236 IPR027417 -
Prci10g2468 663 SUPERFAMILY CYTH-like phosphatases 260 407 IPR033469 -
Prci10g2468 663 Pfam CYTH domain 268 404 IPR023577 -
Prci10g2468 663 CDD UMPK_like 67 239 - -
Prci10g2468 663 PANTHER URIDINE KINASE 30 423 - -
Prci10g2468 663 Gene3D - 253 413 - -
Prci10g2468 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2468 Prci-Chr10 32229797 32238439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2468 53 236 PRT Gene Family AT1G55810 27.835 1.75e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2468 K00876 - qsa:O6P43_032837 1068.91