Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2467 ATGGAAAGAAGAGAAGATTTTTCTTCCTTTATTTTAGCTTTCTTCATCATCATCATCATCTTCTTCTGTACTTCAATTTCTGGTTTGCTTTCTCCGACAGGTGTCAACATTGAAGTGCAAGCTCTTATAGGAATTAAGAGTTCTTTAAAGGATCCCAACAAAGCCCTTCATAACTGGGATATGAATGAAGTAGATCCTTGTAACTGGGCTTTGGTATCCTGCTCTTCTGATCGTTCGGTGACTACCCTGCAATTTCCAAGCCAAAACTTTTCTGGTTTTCTTTACCCAGGCATCAGCAACTTAACAAATCTCAGGACTCTGAGCCTGCAAGGTAATAATATATCAGGACCAATTCCTTTTGAGATTGGGATGCTACAAAAGCTTCAAACTCTTGATATTTCTCGGAATTCCTTCACTGGTCAACTTCCAGAGAGTCTCTCCCACATGAAGAGTCTCAATTATCTGAGGCTCAACAATAATAGTCTCACAGGACCAATACCTTCCTCTTTGGCTAACATGACACAGCTTGCTATTCTGGATCTTTCTTATAATAACTTGAGTGGACCTCTACCTACAATAAATGCAAAAACATTCAATATTGCAGGAAATCCCCAGATTTGTGCCACTGGAACTGACCAACATTGCTTCAGAACAACACAACTTTCAACCAATTTTAATAGCTCCCAAGGGTCACCACCCACAAATAAACCAAAGAATCGCAAACTTGCCCTGGCACTTGCTTTAACTGTAAGCTGCGTCTGCTTCCTAATTCTAGTGTTTGGCTTCCTCTGGTGGAGGCAAAGATCTAGCAAGCAAGTTTTCTTCGACATTAATGAACAAATGCTAGAAGATGTGCGGCTCGGAAACCTAAGAAAGTTCCACATAAGAGAACTTGAGGTTGCCACGAACAAGTTCAGCAGCAAGAACTTGATAGGCAAAGGAGGATATGGGAATGTGTACAAAGGCTATCTTCCAGATGGTGGGGTCATAGCAGTGAAAAGGCTTAGAGATGGCAGTGCCATTACAGGGGAGATTCAGTTTCAGACTGAAGTGGAGATGATCTGCCTTGCTGTACATCGCAACTTGCTTCGTCTCTATGGTTACTGTGTCACTCCTACAGAGAGACTCTTGGTTTATCCCTTCAAGTCCAATGGTAGTGTTGCTTCACGTCTCAAAGTGAAGCCTGCTTTAGAGTGGAGCACAAGGAAGAGGATAGCTTTAGGAGCGGCTAGAGGGTTAGTATACCTACATGAGCAGTGTGATCCCAAGATTATTCATAGGGATGTGAAGGCTGCAAATATATTGCTTGATGAGTACTGTGAAGCTGTGGTTGGCGATTTTGGGTTAGCAAAACTGCTAGATCATAGAGATTCACATGTCACTACAGCTGTTAGAGGCACTGTAGGCCATATAGCACCAGAGTACCTCTCAACAGGCCAGTCTTCTGATAAAACTGATGTCTTTGGCTTTGGGATTCTTCTCCTTGAACTCATCTCTGGCCGTACAGCTCTTGAGTTTGGAAAAGCAGCTAACCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAAATGCATCAAGAGAAGAAGCTTGACTTGCTGATTGACAAGGACCTCAGAAACAACTATGACAGGATTGAGCTTGAAGAAATGGTTCGAATAGCGCTCTTGTGCACCCAGTACCTTCCAGCTCATAGACCCAAAATGTCTGAAGTGGTTAGGATGCTTGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCTTCAAAGGGATCTGAATCAACAAGGAGCAGGGAAAATGAGCTATCTTCTTCAGAACGCTACTCTGATCTCACTGACGACTCTACACTGCCTAATCAGGCCATGGAGCTTTCTGGCCCAAGGTGA 1878 0.4329 MERREDFSSFILAFFIIIIIFFCTSISGLLSPTGVNIEVQALIGIKSSLKDPNKALHNWDMNEVDPCNWALVSCSSDRSVTTLQFPSQNFSGFLYPGISNLTNLRTLSLQGNNISGPIPFEIGMLQKLQTLDISRNSFTGQLPESLSHMKSLNYLRLNNNSLTGPIPSSLANMTQLAILDLSYNNLSGPLPTINAKTFNIAGNPQICATGTDQHCFRTTQLSTNFNSSQGSPPTNKPKNRKLALALALTVSCVCFLILVFGFLWWRQRSSKQVFFDINEQMLEDVRLGNLRKFHIRELEVATNKFSSKNLIGKGGYGNVYKGYLPDGGVIAVKRLRDGSAITGEIQFQTEVEMICLAVHRNLLRLYGYCVTPTERLLVYPFKSNGSVASRLKVKPALEWSTRKRIALGAARGLVYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELISGRTALEFGKAANQKGAMLDWVKKMHQEKKLDLLIDKDLRNNYDRIELEEMVRIALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASKGSESTRSRENELSSSERYSDLTDDSTLPNQAMELSGPR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2467 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Prci10g2467 625 Gene3D Ribonuclease Inhibitor 35 217 IPR032675 -
Prci10g2467 625 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Prci10g2467 625 MobiDBLite consensus disorder prediction 582 605 - -
Prci10g2467 625 MobiDBLite consensus disorder prediction 582 625 - -
Prci10g2467 625 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 18 585 - -
Prci10g2467 625 FunFam Putative LRR receptor-like serine/threonine-protein kinase 35 217 - -
Prci10g2467 625 FunFam Somatic embryogenesis receptor kinase 1 274 381 - -
Prci10g2467 625 Gene3D Transferase(Phosphotransferase) domain 1 383 594 - -
Prci10g2467 625 SUPERFAMILY Protein kinase-like (PK-like) 290 578 IPR011009 -
Prci10g2467 625 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Prci10g2467 625 ProSiteProfiles Protein kinase domain profile. 305 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2467 625 FunFam Somatic embryogenesis receptor-like kinase 1 382 594 - -
Prci10g2467 625 SUPERFAMILY L domain-like 38 200 - -
Prci10g2467 625 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Prci10g2467 625 SMART serkin_6 305 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2467 625 Pfam Leucine Rich repeat 101 116 IPR001611 GO:0005515
Prci10g2467 625 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Prci10g2467 625 Pfam Protein kinase domain 306 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2467 Prci-Chr10 32217140 32223255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2467 15 625 Receptor kinase-like Gene Family AT5G16000 68.277 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci10g2467 Pkinase 3.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2467 - - gmx:100790194 936.021