Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2466 ATGGAAGCCATCCGAGTAATCTCCAGAGCTTCAGTCCAGGCACGAAGTGACGTTAATAATGGTGACTCACCAAAACAAATCGACTTGAATCCATGGGATCTTCAGTTTCTAGCAAATGAGTATGCTCGGAAGGGTCTTCTTTTTCACAAACCCTCATCATCATCATCTTTCAAACACACAGAGACATTGATCCTTCACTTGAAGGACTCGTTTTCTCTTGCCGTTGACCTCTTCCCACCCGTTGCCGGCCGTCTTACCGTCGTCCACCACGACGATGATGACACATCCTCCGTCTTCATCACTTGCAACAACGCCGGAGTAAGCTTTGTTCATGCAGTTGCAGAGAACACATCAATTGCTCACATCATCGAACCCACTTATGTTCCTTCAATTCTCCACTCCTTCTTCCCACTTGGAAATTTCAAGAACTTTGAAGGAACTCAGGTTCCATTAATGGCTGTTCAAGTTACAGAGCTAGTGGACGGCATCTTCGTCGCTTGCTCGATGAACCATTGTCTGTTTGATGTGAAGCCGGCTTGGGATTTCTGGAATGCATGGGCAGAGATCTCACGAAATGGTTTAAACCACATTGCTTCAGATTCAAAGTTCGCTTCATTTGAGCGATGGTTTCCTCACGATAATATTGAACGTCCTATACGAATCCCATTCAAAGAAATGATAGAGAATTACAGTAAGGGGTCTGGTAATTCGGTTCAGCTGCCTTCATTCTCTAGGAGGATCTTTCACTTTAAAAGGGAAAAAATTGCAGAACTCAAAGCAAAAGCTAACACAGAGGTACAGGATGGTGGGGTCATGATCAGCAAAATCTCGTCCTTGCAAGCTGTTCTAGGCCATGTTTGGAGGTCTGTGATCAGAATTCAGAATCTTGATCCAGAAGAAGAAGTCACTTACAGATTCCTCATAGCTGCTAGATCCAGAATTTATCACCCACCAATACCAGACAACTATTTTGGAAACGCTGTGCAATACACTACTGTGACGATGAAAGTAAGAGACTTAGTTGGAGATGGAGGCCTTGGAAAGTTTGCTTTGGAGATGAACAAAGTAATCGCGTCATTCACAGAAGAGAAGATCAAGAAGGACTTTGACGCTTGGATACAAAATCCAACCATGCCTTCACAACATGGCACAATTGGCAAGTTTATGACAACAAATAACTCTCCAAGAATCAACTTTTATGAATTTGACTTCGGCTGGGGAAGGCCGGTGGCGGTTCGTCTCGGTCCAACCAACTCAAGGATGTGGAAGCTGGTCGCCGATGCCGGAGCAGAAGAAGGTAGCTTCGACTTTGAGCTGTACATGTCTCATGATATATTGGAAGCTCTGGTAAGAGACTATGAGTTCATGAACATGGTTTCACCACCACCACCTTTGATGGGGTATCCAATTAATGAATTAGCACAGGCTTAA 1431 0.4423 MEAIRVISRASVQARSDVNNGDSPKQIDLNPWDLQFLANEYARKGLLFHKPSSSSSFKHTETLILHLKDSFSLAVDLFPPVAGRLTVVHHDDDDTSSVFITCNNAGVSFVHAVAENTSIAHIIEPTYVPSILHSFFPLGNFKNFEGTQVPLMAVQVTELVDGIFVACSMNHCLFDVKPAWDFWNAWAEISRNGLNHIASDSKFASFERWFPHDNIERPIRIPFKEMIENYSKGSGNSVQLPSFSRRIFHFKREKIAELKAKANTEVQDGGVMISKISSLQAVLGHVWRSVIRIQNLDPEEEVTYRFLIAARSRIYHPPIPDNYFGNAVQYTTVTMKVRDLVGDGGLGKFALEMNKVIASFTEEKIKKDFDAWIQNPTMPSQHGTIGKFMTTNNSPRINFYEFDFGWGRPVAVRLGPTNSRMWKLVADAGAEEGSFDFELYMSHDILEALVRDYEFMNMVSPPPPLMGYPINELAQA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2466 476 Pfam Transferase family 26 455 - -
Prci10g2466 476 Gene3D - 226 451 IPR023213 -
Prci10g2466 476 Gene3D - 2 217 IPR023213 -
Prci10g2466 476 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2466 Prci-Chr10 32205800 32207230 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2466 48 444 Monolignol Biosynthesis Gene Families AT5G48930 25.293 6.65e-21 93.2