Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2459 ATGGCGGTTCAAGTCACAGAGCTCGTGGACGGCATCTTCTTTGCTTGCTCCATGAACCATTGTCTTCCTGAGGTGAAGTCATTTTGGAATTTATTGAATATATGGGCTCAGATCACTCGAAATGGTTCAAATCACATAGCTTCAGACTCAAAGCTCGCTTCATTTGAAAGATGGTTTCCTCATAATAATATTGAGCGGCCCATTCGAATCCCATTCAGAAAAATAATGGAGAATTATCGCAGGGAGTCAATTAACTCGCTTCAACCACCTCCATTTCCAAGGAGGATATTCCACTTTGAAGCGGAAAAAATTGCAGAACTCAAAGCGAAAGTTAATTCAGAGGAAGAAGATGGTGTCATCAGCAACAAAATCTCCTCCTTGCAAGCTATCCTAGCACAGGTTTGGAGGTCAGTGATCAAAAACCAGAATCTTGATCCAGAAGAAGAAGTTACTTACAGATTTCTTGTAGCTGCTAGATCTAGAATTTCTCACCCACCAATACCAGACAATTATTTTGGAATCACAGTGCGTTTTGCTACAGTGACGATGAAAGTAAGGGATTTGGTGGGAGATGGAGGACGTGGGAGGTTTGCTTTGGAGATGAACAACATGGTCACTTCATACACAGAAGAAAGGATTAAGAGGGACTTTGAAGCTGGGGTACAAATTCCAACGATGCGTTCACTACGTAGCAGAATCGGGAAGATCATGGGAACCAGCAGCTCTCCTAGAGTCAACTTTTATGCCATTGACTTTGGCTGGGGACGGCCAGTGGCGGTTCGCGGCGGCCCGGCCAATGCAAAGTCGTGGAAGCTAATGGTCGATGCAGGAATAGAAGAAGGTAGCTTGGGCATTGAGCTTTCTGCCTCCTGTGAATTACTGGAAGCTTTGGGAAAAGAACCTGAGTTCAAGCATGCAGTGGCACCGCCATCACTGCGGTGGCTGCCGGCGGAGTTATCAAATAAAGTAGCCCGGACTCGACTCTGA 987 0.4559 MAVQVTELVDGIFFACSMNHCLPEVKSFWNLLNIWAQITRNGSNHIASDSKLASFERWFPHNNIERPIRIPFRKIMENYRRESINSLQPPPFPRRIFHFEAEKIAELKAKVNSEEEDGVISNKISSLQAILAQVWRSVIKNQNLDPEEEVTYRFLVAARSRISHPPIPDNYFGITVRFATVTMKVRDLVGDGGRGRFALEMNNMVTSYTEERIKRDFEAGVQIPTMRSLRSRIGKIMGTSSSPRVNFYAIDFGWGRPVAVRGGPANAKSWKLMVDAGIEEGSLGIELSASCELLEALGKEPEFKHAVAPPSLRWLPAELSNKVARTRL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2459 328 Pfam Transferase family 1 302 - -
Prci10g2459 328 Gene3D - 74 299 IPR023213 -
Prci10g2459 328 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 303 - -
Prci10g2459 328 Gene3D - 1 69 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2459 Prci-Chr10 32028733 32030450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2459 1 299 Monolignol Biosynthesis Gene Families AT5G48930 23.620 5.64e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2459 - - pcin:129284394 647.891