Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2456 ATGGCAGCGACCAGAGTGATCTCCAATACTACAATCCAAGCACGAAGCCATGTTTATATGAATGGCGATTCACCTGCACGAATTGAGCTTAATCCATGGGATCTTCGTTTCATAGTTCTCGAGTATGGTCAAAAGGGCCTTCTTTTCCACAAACCCACCATATTATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTATCACACAGACAAAGTGATCCAGCACCTTAAGGGCTCTCTTTCTGCCACCCTCAACTTCTTCTTGCCGCTCGCCGGCCGTCTTGCTATTGTCCCCGACGCCGACAATGATGGCATCTCTTCAGTCTTCATCACTTGCAACAACGCTGGAGCAAGCTTTGTTCATGCAATTGCAGAGAACACTACAACGGCCGACATCCTCGAACCAACTTATGTTCCTCCGATCGTCGAGTCCTTCTTCCCACTTGGCAAATCGAAAAACTTCGAAGCAACTCATATCCCATTAATGGCGGTTCAAGTTACGGAGCTTGTGGACGGCATCTTCATCGCTTGCTCGATGAACCATTGTCTTGTTGAAGTGAAGCCATACTGGAATTTCTTGAACACTTGGGCTGAGATTAGCCGAAATCGTTTGAACCACTTAGGGTCGGATTTGAAGCTTGCATCATTTGAACGTTGGTTTCCACGTGCTGATATTGAACGCCCCATACGAATACGATTCAAACAAATAATGAAGGAATATTATCTTGATGAATCTGCTTATTCTCATCTTTCACCTCCAATTTCGAAGAGGATCTTCCACTTTAAAAGACAAAAAATTGCTGAACTCAAAGCAAAAGCTCTATCAGAGGTGGTAGACGATGGTGTGGTCAGCAATGAAATCTCCTCTCTGCAAGCTGTCGTCAGCCATATTTGGAGATCTGTGATAAAAAATCAGAATCTTGATCCCGAAGAAGAAGTCGCTTTCAGATTCCTTGTATCTGCTAGGTCCAGAATTTCAAACCCACCAATTCCCGAAAGCTATTTCGGAAACACAGTGCAATTTGCTAGCGTGATGATGAAAGTAAGAGACCTGGTGGGTGATAGAGGACTTGGAAAATTTGCTTTGGAGATGAACAAGAAGATCTCGGAATACACAGAGCAGAAGATCAAGATGGACTTTGAAGCTTTGATCCCAAATCCCATGGTGCGTTTACAGAGTGGCATAATTGGGAAGGTTATGAATTGTGGCAGCAGCACAAGAATCAACTTTTACGCCATCGACTTCGGCTGGGGAAGACCGGCAGCAATTCGCCGTGGCCCTGCTTTTATGCATGATTGGGACCTGGTGGCCGATGCCGGAGCAGAAGAAGGTAGCTTTGACATTGAGCTTTGCATGTCCTATGAAATATTAGAAACTATGGGAAGAGACCCTGAGTTCATGCATGCGGTGTCGCCGCCGGAGCCAGTAAGGTTATCCAATAAACTAGCACGAGGTCGACTGTGA 1470 0.4517 MAATRVISNTTIQARSHVYMNGDSPARIELNPWDLRFIVLEYGQKGLLFHKPTILSSSSSSSSSSSSSYHTDKVIQHLKGSLSATLNFFLPLAGRLAIVPDADNDGISSVFITCNNAGASFVHAIAENTTTADILEPTYVPPIVESFFPLGKSKNFEATHIPLMAVQVTELVDGIFIACSMNHCLVEVKPYWNFLNTWAEISRNRLNHLGSDLKLASFERWFPRADIERPIRIRFKQIMKEYYLDESAYSHLSPPISKRIFHFKRQKIAELKAKALSEVVDDGVVSNEISSLQAVVSHIWRSVIKNQNLDPEEEVAFRFLVSARSRISNPPIPESYFGNTVQFASVMMKVRDLVGDRGLGKFALEMNKKISEYTEQKIKMDFEALIPNPMVRLQSGIIGKVMNCGSSTRINFYAIDFGWGRPAAIRRGPAFMHDWDLVADAGAEEGSFDIELCMSYEILETMGRDPEFMHAVSPPEPVRLSNKLARGRL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2456 489 Gene3D - 240 463 IPR023213 -
Prci10g2456 489 Gene3D - 4 239 IPR023213 -
Prci10g2456 489 Pfam Transferase family 70 469 - -
Prci10g2456 489 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2456 Prci-Chr10 31959725 31961401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2456 49 460 Monolignol Biosynthesis Gene Families AT5G48930 25.977 4.80e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2456 - - pcin:129321848 577.785