Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2398 ATGAACTGCTTGAACAAAAGTTGGGGCCATGTTCACTTCCTATGCAAGATTTGGTGGTTCAAGATAAGAGTGATCAGTTGTGGGTTATTCATAATATTGTTAAGACATCTACCAAAATTTAGGGGTAATAAGCGTGCTTTGATATCATCGCTATATGACATCGAAGCACGTGATAGAGAAATAGATAAATCAGGAGAAATAGCTACAGTTGGGATAGGATATCACCATGTAGAAAAATTAATTGAGCTCGTGGACTTGGGCTCAAATTATGATGTGCGACTTGTAGGGATTAGTGGGATGGGGGGAGTAGGGAAGACAGCTCTTGCCGAAGATGTCTTTAAAAAAATCTCCCACCTTTTTGATCCTGCCTATTTCATCTCCACTCCAACTACCGCTCAAGATTATCCTCCAAGTCAATCCATATTAAAGGAGGCCTGTCTTCAGATAGCTTTGCCAAAAGAATTTCAACCTTCATATTTAAAAAGCCCAAGACTCCAGCGGATGCTTGTTGTTTTTGATGATGTTGAGTACTCGAAACATTTTAATGGAGGATGGATTAGACGGTTGTTTGGAGGAGGAAGTAGAATTATCATGACAAGCAGAGACGAGGGACTCCTTAGACATCCTGGAGTAGATGAGATTCACGAGGTGGAACTATTGAATCAAAATGAAGCTCTTCAACTTTTCTGCAAAATCGTTTTCAAAAGTGATAAACCAATGACAGGTTATGAGGGGCTGACCCTCGAAGCACTTAAATATGCTGACGGCCTTCCATTAGCTATTAAATCAGTAGGTTCATCGCTTGTTGATCTAAGTGTCTCAGAGTGGAAAAGTGTGTTGACCAAACTTCAAACAGTTCCTGACCCTTCAGTACTCGCAGTGCTTAAGAAAAGTTTTGATGGACTCACAGATTGGCAAAAGAATGCCTTCTTGGATATTGCATGTTGTTTTGCAGGACAAAAGATTGATCATATCAAAGGAATTTTATTTTGTCGATATGTTTTTTCATCTTTTCGTGATATGATAATCGAAAGTCTTATAGAAAAGTCAGTGATGAGCATATCAAGTCAAAGAATAAAAATACATCCTATCCTACAACAATTAGCAAAAGTAATTGTTCTTGATGAATCTCCTGAACCTGGACAGCGGAGTAGGATATGGAATTATGAAGATTTCTGTTATATCATGGAGACAAACACTGGAACTGATTGTGTTGAAGTCATAGTACTCTCAAATGATGAAGAACATCCACAAGGAACAACATTAAACATAGAAGGTTTATCAAAATTGACAAGACTTAGAATCCTTATATTCCACAACGTGAAATTTTCAGGAAATCTCTGA 1344 0.3802 MNCLNKSWGHVHFLCKIWWFKIRVISCGLFIILLRHLPKFRGNKRALISSLYDIEARDREIDKSGEIATVGIGYHHVEKLIELVDLGSNYDVRLVGISGMGGVGKTALAEDVFKKISHLFDPAYFISTPTTAQDYPPSQSILKEACLQIALPKEFQPSYLKSPRLQRMLVVFDDVEYSKHFNGGWIRRLFGGGSRIIMTSRDEGLLRHPGVDEIHEVELLNQNEALQLFCKIVFKSDKPMTGYEGLTLEALKYADGLPLAIKSVGSSLVDLSVSEWKSVLTKLQTVPDPSVLAVLKKSFDGLTDWQKNAFLDIACCFAGQKIDHIKGILFCRYVFSSFRDMIIESLIEKSVMSISSQRIKIHPILQQLAKVIVLDESPEPGQRSRIWNYEDFCYIMETNTGTDCVEVIVLSNDEEHPQGTTLNIEGLSKLTRLRILIFHNVKFSGNL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2398 447 SUPERFAMILY "Winged helix" DNA-binding domain 291 396 IPR036390 -
Prci10g2398 447 PRINTS Disease resistance protein signature 94 109 - -
Prci10g2398 447 PRINTS Disease resistance protein signature 162 176 - -
Prci10g2398 447 PRINTS Disease resistance protein signature 254 268 - -
Prci10g2398 447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 440 IPR044974 GO:0006952
Prci10g2398 447 Gene3D - 62 212 IPR027417 -
Prci10g2398 447 Pfam NB-ARC domain 76 285 IPR002182 GO:0043531
Prci10g2398 447 Gene3D - 219 303 IPR042197 -
Prci10g2398 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2398 Prci-Chr10 31360756 31366201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2398 76 397 WRKY Transcription Factor Family AT5G45050 34.441 3.96e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2398 - - pcin:129321912 895.96