Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2396 ATGCAAGATTTGGTGGTTCAAGATAAGATATCATCGCTATATGACATCGAAGCACGTGATAGAGAAATAGATAAATCAGGAGAAATAGCTACAGTTGGGATAGGATATCACCATGTAGAAAAATTAATTGAGCTCGTGGACTTGGGCTCAAATTATGATGTGCGACTTGTAGGGATTAGTGGGATGGGGGGAGTAGGGAAGACAGCTCTTGCCGAAGATGTCTTTAAAAAAATCTCCCACCTTTTTGATCCTGCCTATTTCATCTCCACTCCAACTACCGCTCAAGATTATCCTCCAAGTCAATCCATATTAAAGGAGGCCTGTCTTCAGATAGCTTTGCCAAAAGAATTTCAACCTTCATATTTAAAAAGCCCAAGACTCCAGCGGATGCTTGTTGTTTTTGATGATGTTGAGTACTCGAAACATTTTAATGGAGGATGGATTAGACGGTTGTTTGGAGGAGGAAGTAGAATTATCATGACAAGCAGAGACGAGGGACTCCTTAGACATCCTGGAGTAGATGAGATTCACGAGGTGGAACTATTGAATCAAAATGAAGCTCTTCAACTTTTCTGCAAAATCGTTTTCAAAAGTGATAAACCAATGACAGGTTATGAGGGGCTGACCCTCGAAGCACTTAAATATGCTGACGGCCTTCCATTAGCTATTAAATCAGTAGGTTCATCGCTTGTTGATCTAAGTGTCTCAGAGTGGAAAAGTGTGTTGACCAAACTTCAAACAGTTCCTGACCCTTCAGTACTCGCAGTGCTTAAGAAAAGTTTTGATGGACTCACAGATTGGCAAAAGAATGCCTTCTTGGATATTGCATGTTGTTTTGCAGGACAAAAGATTGATCATATCAAAGGAATTTTATTTTGTCGATATGTTTTTTCATCTTTTCGTGATATGATAATCGAAAGTCTTATAGAAAAGTCAGTGATGAGCATATCAAGTCAAAGAATAAAAATACATCCTATCCTACAACAATTAGCAAAAGTAATTGTTCTTGATGAATCTCCTGAACCTGGACAGCGGAGTAGGATATGGAATTATGAAGATTTCTGTTATATCATGGAGACAAACACTGGAACTGATTGTGTTGAAGTCATAGTACTCTCAAATGATGAAGAACATCCACAAGGAACAACATTAAACATAGAAGGTTTATCAAAATTGACAAGACTTAGAATCCTTATATTCCACAACGTGAAATTTTCAGGAAATCTCTGA 1230 0.3805 MQDLVVQDKISSLYDIEARDREIDKSGEIATVGIGYHHVEKLIELVDLGSNYDVRLVGISGMGGVGKTALAEDVFKKISHLFDPAYFISTPTTAQDYPPSQSILKEACLQIALPKEFQPSYLKSPRLQRMLVVFDDVEYSKHFNGGWIRRLFGGGSRIIMTSRDEGLLRHPGVDEIHEVELLNQNEALQLFCKIVFKSDKPMTGYEGLTLEALKYADGLPLAIKSVGSSLVDLSVSEWKSVLTKLQTVPDPSVLAVLKKSFDGLTDWQKNAFLDIACCFAGQKIDHIKGILFCRYVFSSFRDMIIESLIEKSVMSISSQRIKIHPILQQLAKVIVLDESPEPGQRSRIWNYEDFCYIMETNTGTDCVEVIVLSNDEEHPQGTTLNIEGLSKLTRLRILIFHNVKFSGNL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2396 409 Pfam NB-ARC domain 38 247 IPR002182 GO:0043531
Prci10g2396 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 275 IPR027417 -
Prci10g2396 409 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 402 IPR044974 GO:0006952
Prci10g2396 409 Gene3D - 24 174 IPR027417 -
Prci10g2396 409 SUPERFAMILY "Winged helix" DNA-binding domain 253 358 IPR036390 -
Prci10g2396 409 Gene3D - 181 265 IPR042197 -
Prci10g2396 409 PRINTS Disease resistance protein signature 216 230 - -
Prci10g2396 409 PRINTS Disease resistance protein signature 124 138 - -
Prci10g2396 409 PRINTS Disease resistance protein signature 56 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2396 Prci-Chr10 31360756 31366201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2396 39 359 WRKY Transcription Factor Family AT5G45050 34.545 5.81e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2396 - - pcin:129321912 792.341