Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2391 ATGGACTTAGGCTCAAAGGATGATGTGCGAGTTGTAGGGATTAGTGGGATGGGGGGAGTAGGGAAGTCAGCTCTTGCCGGAGATGTCTTAAACAAAATCTCCCACCGTTTTGATTCTGCCTATTTCATCTCCACTCCAACTACCGCTCAAGCTTTTCCCCCAAGTCAATCCATATTAAAGGAGGCATTTCTTCAGATAGCCTTGCCACTAAAATTTGGACTTTCATATTCAAGCCCAAGTCTCCATAGGATGCTTGTTGTTTTTGATGATGTTGAGTACTGGAAACCTTTCAATGGAGGATGGATTAGAGGGTTGTTTGGAGGAGGAAGTAGAATTATCATAACAAGCCGAGATGAGGGACTCCTTAGACATCTTGGAGTAGATGAGATTCACAAGGTAGAACTAGTGAATCAAAATGAAGCTCTTCGGCTTCTCTGCAAAATTGTTTTCAGAAGTGATAAACCAATGACAGGTTATGAGGAGCTGACCCTCGAAGCACTTAAATATGCTGATGGCCTTCCATTAGCTATTAAATCAGTAGGTTTATCGCTTGTTGATCAAAGTGTCTCAAAGTGGAAACGTGTGTTGACCAAACTTCAAACAGTTCCTGACGCTTCAGTACTCGCAGTGCTTAAGAAAAGTTTTGATGGACTCACAGGTTGGCAAAAGAATGCTTTCTTGGATATTGCATGTTGTTTTGCAGGACAAAAGATTGATTATATCAAGGGAATTTTATTTTGTCAATATCTTTTTAGATCTTTGCGTGATATGATAATCGAAAGTCTTATAGAAAAGTCACTAATAAACATATCAAGTCAGAGAATAAAAATACATCGTCTCCTACAACAATTAGCAAAATTAATTGTTCAACATGAATCTCCTGAACCTGGAAATCGGAGTAGGATATGGAATTATGAAGATTTTCGTCATATCATGGAGACAAATACTGGAACTAATCATGTTCGAATCGTAGTACTCTCAAATGATGAAGAGCATCCACGGCGGACAACATTGAACATAAAAGGTTTATCAAAATTGAGGAAACTCAAAATCCTTATATTCCACAATGTGAAATTTTTAGGAAATCTCTATGATCTTTCTAACAACTTGAGATATCTTTCCTGGCATAAGTATCCACTTAATTATTTGCCACCAAATTTTAAGCCAAAAAGGCTTGTGGAATTGATCATGCCAGATAGCAGCATCACACAACTATGGAGAGATAAAGAGAAAGAGATGCAATACCTGGAGAACTTGAACCTCCGTGGCTCTAAAGATTTGATGAAGATCCCTCATTTTGGATTGCTTCCAAGTCTTGAGAGGTTAGACTTGGAAGGATGTACTTCATTAGTGCAGCTTCATCCTTCTATTGCGTATTTGACAAGGCTTAAGTTTTTGAATTTGAGAAACTGCACAAATCTAGAAAGTATTCCAAATGAATTATTTGGCAAAAGCTCTCTTGAATTTCTAAATCTGGCTGGCTCCTCCAAATTTGCTCAAAGTTTGAGGTTCAAGAGAGTAACATTAAGTTGGTCTTCTGTTAGAGTTACGTGCCTTTATCATGTTTTCATTATATGA 1578 0.379 MDLGSKDDVRVVGISGMGGVGKSALAGDVLNKISHRFDSAYFISTPTTAQAFPPSQSILKEAFLQIALPLKFGLSYSSPSLHRMLVVFDDVEYWKPFNGGWIRGLFGGGSRIIITSRDEGLLRHLGVDEIHKVELVNQNEALRLLCKIVFRSDKPMTGYEELTLEALKYADGLPLAIKSVGLSLVDQSVSKWKRVLTKLQTVPDASVLAVLKKSFDGLTGWQKNAFLDIACCFAGQKIDYIKGILFCQYLFRSLRDMIIESLIEKSLINISSQRIKIHRLLQQLAKLIVQHESPEPGNRSRIWNYEDFRHIMETNTGTNHVRIVVLSNDEEHPRRTTLNIKGLSKLRKLKILIFHNVKFLGNLYDLSNNLRYLSWHKYPLNYLPPNFKPKRLVELIMPDSSITQLWRDKEKEMQYLENLNLRGSKDLMKIPHFGLLPSLERLDLEGCTSLVQLHPSIAYLTRLKFLNLRNCTNLESIPNELFGKSSLEFLNLAGSSKFAQSLRFKRVTLSWSSVRVTCLYHVFII 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2391 525 Gene3D Ribonuclease Inhibitor 272 508 IPR032675 -
Prci10g2391 525 Pfam NB-ARC domain 5 202 IPR002182 GO:0043531
Prci10g2391 525 Gene3D - 136 219 IPR042197 -
Prci10g2391 525 SUPERFAMILY "Winged helix" DNA-binding domain 207 312 IPR036390 -
Prci10g2391 525 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 487 IPR044974 GO:0006952
Prci10g2391 525 SUPERFAMILY L domain-like 334 495 - -
Prci10g2391 525 Gene3D - 1 130 IPR027417 -
Prci10g2391 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 229 IPR027417 -
Prci10g2391 525 PRINTS Disease resistance protein signature 170 184 - -
Prci10g2391 525 PRINTS Disease resistance protein signature 434 450 - -
Prci10g2391 525 PRINTS Disease resistance protein signature 11 26 - -
Prci10g2391 525 PRINTS Disease resistance protein signature 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2391 Prci-Chr10 31315012 31321621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2391 8 495 WRKY Transcription Factor Family AT5G45050 32.625 1.08e-66 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2391 - - pcin:129321206 1047.73