Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2390 ATGGACTTAGGCTCAAAGGATGATGTGCGAGTTGTAGGGATTAGTGGGATGGGGGGAGTAGGGAAGTCAGCTCTTGCCGGAGATGTCTTAAACAAAATCTCCCACCGTTTTGATTCTGCCTATTTCATCTCCACTCCAACTACCGCTCAAGCTTTTCCCCCAAGTCAATCCATATTAAAGGAGGCATTTCTTCAGATAGCCTTGCCACTAAAATTTGGACTTTCATATTCAAGCCCAAGTCTCCATAGGATGCTTGTTGTTTTTGATGATGTTGAGTACTGGAAACCTTTCAATGGAGGATGGATTAGAGGGTTGTTTGGAGGAGGAAGTAGAATTATCATAACAAGCCGAGATGAGGGACTCCTTAGACATCTTGGAGTAGATGAGATTCACAAGGTAGAACTAGTGAATCAAAATGAAGCTCTTCGGCTTCTCTGCAAAATTGTTTTCAGAAGTGATAAACCAATGACAGGTTATGAGGAGCTGACCCTCGAAGCACTTAAATATGCTGATGGCCTTCCATTAGCTATTAAATCAGTAGGTTTATCGCTTGTTGATCAAAGTGTCTCAAAGTGGAAACGTGTGTTGACCAAACTTCAAACAGTTCCTGACGCTTCAGTACTCGCAGTGCTTAAGAAAAGTTTTGATGGACTCACAGGTTGGCAAAAGAATGCTTTCTTGGATATTGCATGTTGTTTTGCAGGACAAAAGATTGATTATATCAAGGGAATTTTATTTTGTCAATATCTTTTTAGATCTTTGCGTGATATGATAATCGAAAGTCTTATAGAAAAGTCACTAATAAACATATCAAGTCAGAGAATAAAAATACATCGTCTCCTACAACAATTAGCAAAATTAATTGTTCAACATGAATCTCCTGAACCTGGAAATCGGAGTAGGATATGGAATTATGAAGATTTTCGTCATATCATGGAGACAAATACTGGAACTAATCATGTTCGAATCGTAGTACTCTCAAATGATGAAGAGCATCCACGGCGGACAACATTGAACATAAAAGGTTTATCAAAATTGAGGAAACTCAAAATCCTTATATTCCACAATGTGAAATTTTTAGGAAATCTCTATGATCTTTCTAACAACTTGAGATATCTTTCCTGGCATAAGTATCCACTTAATTATTTGCCACCAAATTTTAAGCCAAAAAGGCTTGTGGAATTGATCATGCCAGATAGCAGCATCACACAACTATGGAGAGATAAAGAGAAAGAGATGCAATACCTGGAGAACTTGAACCTCCGTGGCTCTAAAGATTTGATGAAGATCCCTCATTTTGGATTGCTTCCAAGTCTTGAGAGATTTTGA 1329 0.383 MDLGSKDDVRVVGISGMGGVGKSALAGDVLNKISHRFDSAYFISTPTTAQAFPPSQSILKEAFLQIALPLKFGLSYSSPSLHRMLVVFDDVEYWKPFNGGWIRGLFGGGSRIIITSRDEGLLRHLGVDEIHKVELVNQNEALRLLCKIVFRSDKPMTGYEELTLEALKYADGLPLAIKSVGLSLVDQSVSKWKRVLTKLQTVPDASVLAVLKKSFDGLTGWQKNAFLDIACCFAGQKIDYIKGILFCQYLFRSLRDMIIESLIEKSLINISSQRIKIHRLLQQLAKLIVQHESPEPGNRSRIWNYEDFRHIMETNTGTNHVRIVVLSNDEEHPRRTTLNIKGLSKLRKLKILIFHNVKFLGNLYDLSNNLRYLSWHKYPLNYLPPNFKPKRLVELIMPDSSITQLWRDKEKEMQYLENLNLRGSKDLMKIPHFGLLPSLERF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2390 442 Gene3D - 136 219 IPR042197 -
Prci10g2390 442 Pfam NB-ARC domain 5 202 IPR002182 GO:0043531
Prci10g2390 442 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 441 IPR044974 GO:0006952
Prci10g2390 442 Gene3D Ribonuclease Inhibitor 260 442 IPR032675 -
Prci10g2390 442 PRINTS Disease resistance protein signature 78 92 - -
Prci10g2390 442 PRINTS Disease resistance protein signature 11 26 - -
Prci10g2390 442 PRINTS Disease resistance protein signature 170 184 - -
Prci10g2390 442 PRINTS Disease resistance protein signature 411 427 - -
Prci10g2390 442 SUPERFAMILY L domain-like 334 441 - -
Prci10g2390 442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 229 IPR027417 -
Prci10g2390 442 SUPERFAMILY "Winged helix" DNA-binding domain 207 312 IPR036390 -
Prci10g2390 442 Gene3D - 1 130 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2390 Prci-Chr10 31315012 31321778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2390 8 430 WRKY Transcription Factor Family AT5G45050 32.230 5.35e-57 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2390 - - pcin:129321206 882.863