Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2388 ATGGATGTCCAGAGATGTGTAGGGTCGTCGTCCAAGGAGATATGGCCATGGAGCTGTGATGTGTTTGTATTGAATTTCATAACTGAGGACAATCGCTCATTTGTTGAAGACCTTCGCAATGCTCTACATACAAATGGTGTAGTTATGGCTTCACGAGATTCTATTGCTCAAGCTCCCATGGACAAATACAAGCTTTGTGTTTTTATCATCTCAAAAAATTGTGGGGCCCAAACACGCTACTTGGAGGAAAACTTAAAGGGATGTGTAAATTTTCTGCCAATCTTTTGGGAGCGGACTCCTTTCAAGAGCGATCGGCCTCAGGTTATTGGTAATATTCTTGAGAATCATATTAACAACATTTTGCGTGAAAAGCGTGCTCGGATATCAAGTCTATATGACGCAAAGAAAATAGATATATCAGGAGAAATAGCTACAGTTGGGATAGGACATGATCGTGTAGAAAAATTAATTGAGATTCTGAAGTTAGGTTCAAAGGATGATGTGCGAGTTGTAGGGATTAGTGGGATGGGGGGAGTAGGGAAGACAGCTCTTGCCGGGGATGTCTTTAACAAAATCTCCCACCGTTTTGATTCTGCCTATTTCATCTCCATTCCCAGTAACAAAGACATGTTAAAAGAGGCATTTCTTCGGATAGCTTTCCCAGAAGAATTTGAACCTCAATATTCTGAAAGCCTAAGACTACTCTACAGGATGCTTGTTGTTTTTGATGATGTAGATCATCAGGGACTTTTAGATGAAGGATGGATTAGAGGTTTGTTTGGAGGAGGAAGTAGAATTATCATAACAAGCAGAGATGAGGGACTCCTTAGGTATCTTGGAGCAGATGAAATTCACAAGGTGGAACTATTGAATCAAAATGAAGCTCTTCGACTTTTCTCCAAAATTGTTTTCAAATGTTTCAGAGGGGAAAAGTGTGTGTTGACCAGGCTGCAAACGGATCCTGACTTTTCAATGATCGCGGTGCTTCAAAAAAGTTTTGATGGACTCTCATTGGAACGGAGAAAAGCTTTCTTGGATATTGCATGTTGCTTTGCAGGTCAAAAGACAGATTACGTCAAAGGAATTTTACGAACTGAATATCCTGGTCGTTATTCTTAA 1119 0.4021 MDVQRCVGSSSKEIWPWSCDVFVLNFITEDNRSFVEDLRNALHTNGVVMASRDSIAQAPMDKYKLCVFIISKNCGAQTRYLEENLKGCVNFLPIFWERTPFKSDRPQVIGNILENHINNILREKRARISSLYDAKKIDISGEIATVGIGHDRVEKLIEILKLGSKDDVRVVGISGMGGVGKTALAGDVFNKISHRFDSAYFISIPSNKDMLKEAFLRIAFPEEFEPQYSESLRLLYRMLVVFDDVDHQGLLDEGWIRGLFGGGSRIIITSRDEGLLRYLGADEIHKVELLNQNEALRLFSKIVFKCFRGEKCVLTRLQTDPDFSMIAVLQKSFDGLSLERRKAFLDIACCFAGQKTDYVKGILRTEYPGRYS 372
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2388 372 PRINTS Disease resistance protein signature 232 246 - -
Prci10g2388 372 PRINTS Disease resistance protein signature 170 185 - -
Prci10g2388 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 347 IPR027417 -
Prci10g2388 372 Gene3D - 129 284 IPR027417 -
Prci10g2388 372 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 357 IPR044974 GO:0006952
Prci10g2388 372 Pfam NB-ARC domain 152 311 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci10g2388 Prci-Chr10 31272339 31274214 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2388 155 363 WRKY Transcription Factor Family AT5G45050 31.679 1.88e-21 94.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2388 - - pcin:129322556 748.043