Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2386 ATGCGTAATATTGTTGAGAAATCTACCAAAATTTTGTGTGAGCGTGCTCGGATATCATTTGGACATGACATTGAAGCATATGCAAGGGAAATAGATAAATCAAGAGAAATAGCTACAGTTGGGATAGGATATCATCGTGTAGAAAAATTAGTTGAGCTCATGGACTTAGGCTCAAATTATGATGTGCGAGTTGTAGGGATTAGTGGGATGGGGGGAGTAGGGAAGTCAGCTCTTGCGGAAGATGTCTTTGAAATAATCTCCTACCTTCTTGATTCTGCCTATTTCATCTCCACTCCAACTACCACTCAAGATTATCCTCCAAGTCAATCCATATTAAAGGAGGCCTTTCTTCAGATAGCTTTGCCAAAAGAATTTCAACCTTCATATTTAAAAAGCCCAAGACTCCAGAGGATGCTTGTTGAGTACTCGAAACATTTTGATGGAGGATGGATTAGACGGTTGTTTGGAGGAGGAAGTAGAATTATCATAACAAGCAGAGATGAGGGACTCCTTAGACATCTTGGAGTAGATGAGATTCACAAGGTGGAACTATTGAATCAAAATGAAGCTCTTCGACTTTTTTGCAAAATTGTTTTCAAAAGTGATAAACCAATGACAGGTTATGAGGAGCTGACCCTCGAAGCACTTAAATATGCTGATGGCCTTCCATTAGCTGTTAAATCAGTAGGTTCATCGCTTGTTGATCTAAGTGTCTCAGAGTGGAAAAGTGTGTTGACCAAACTTCAAACAGTTCCTGACCCTTCAGTACTCACAGTGCTTAAGAAAAGTTTTGATGGGCTCACAGATTGGCAAAAGAATGCTTTCTTGGATATTGCATGTTGTTTTGCAGGACAAAAGATTGATTATATCAAGGGAATTTTATTTTGTCAATATCTTTTTCGATTTTTTTATGAGATGATAATCGAAAGTCTTATTGAAAAGTCACTGATGAGCATATCAAGTCAAAGAATAAAAATACATCGTCTCCTAGAACAGTTAGCAAAACTAATTGTTCTTGATGAATCTCCCGAACCTGGAAAGCGGAGTAGGATATGGAATTATGAAGATTTTCGTCATATCATGGAGGCAAATGCTGGAACTAATCGTGTTCAAATCATAGTACTCTCAAATGATGAAGAGCATCCACAGGGGACAACTTTGAACATAGAAGGTTTATCAAAATTGAGGAAACTCAAAATCCTTATATTTCACAATGTGTAA 1221 0.3759 MRNIVEKSTKILCERARISFGHDIEAYAREIDKSREIATVGIGYHRVEKLVELMDLGSNYDVRVVGISGMGGVGKSALAEDVFEIISYLLDSAYFISTPTTTQDYPPSQSILKEAFLQIALPKEFQPSYLKSPRLQRMLVEYSKHFDGGWIRRLFGGGSRIIITSRDEGLLRHLGVDEIHKVELLNQNEALRLFCKIVFKSDKPMTGYEELTLEALKYADGLPLAVKSVGSSLVDLSVSEWKSVLTKLQTVPDPSVLTVLKKSFDGLTDWQKNAFLDIACCFAGQKIDYIKGILFCQYLFRFFYEMIIESLIEKSLMSISSQRIKIHRLLEQLAKLIVLDESPEPGKRSRIWNYEDFRHIMEANAGTNRVQIIVLSNDEEHPQGTTLNIEGLSKLRKLKILIFHNV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2386 406 Gene3D - 184 268 IPR042197 -
Prci10g2386 406 PRINTS Disease resistance protein signature 64 79 - -
Prci10g2386 406 PRINTS Disease resistance protein signature 219 233 - -
Prci10g2386 406 PRINTS Disease resistance protein signature 393 406 - -
Prci10g2386 406 SUPERFAMILY "Winged helix" DNA-binding domain 256 361 IPR036390 -
Prci10g2386 406 Pfam NB-ARC domain 158 250 IPR002182 GO:0043531
Prci10g2386 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 278 IPR027417 -
Prci10g2386 406 Gene3D - 28 179 IPR027417 -
Prci10g2386 406 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 403 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2386 Prci-Chr10 31251890 31256855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2386 47 362 WRKY Transcription Factor Family AT5G45050 33.030 8.36e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2386 - - pcin:129321912 662.914