Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2363 ATGGTCGCCATCCGAGTGGTGTCTACAGCTACGATCCAAGCAAGAAGTCAAGTTAATTATGGTGATTCGCCTGAAGAAATCGAGCTCAATCCCTGGGATCTCCAATTTCTGCTAAGTGAGTATGCCCAAAAAGGTATTCTTTTTCGCAAACCCATCTTGTCTTCTTCTACTTGCTCTGGTTCTTCTTCTTCTTCAGATTACACACACAAAACTATCCAGCACCTTAAGGACTCTCTTTCTTCCACCCTCGACTTCTTCCGGCCCCTTGTCGGCCGTTTAGTTATCGTCCCTCACGGCGGCGATGATGATACCTTCTCCATCTTCGTCTCTTGCAACAACACCGGAGCAAGTTTTGTTCATGCTATTGCAGAGAACACTGCAATTTCCGACATCGTTGAGCCCACTTATGTTCCTCCATTTGTCCACTCCTTCTTCCCACTCTACAGATCCAAGAACATCGAAGGAACTCAGATCCCATTATTGGCTGTCCAAGTTACAGAGCTCGTGGATGGCATCTTCATGGCTTGTTCGATAAACCATTGTCTTGCCGATGCGAAGCCGTTCATGGATTTCGTGTTTGCGTGGGCTAACATCTCTAGAAATGGTTTAAACCATATAGCCTCGACTTCAAAGCTCGCTTCATTCGACCGATGGTTTCCTCCTGGTAATATCCCACGTCCTATACGAATTCCATTCAGAGAAATAAAGGACACTAATCTTAATACGCCCATTGATTCAAACCAGCCTTTTCCATTCTCTCAGAGGTTCTTCCACTTTAAAAGGGAAAAAATTGTCGAACTGAGAGAAAAAGCAAAGTCAGAGATAGAGGATGGTGCTATCGTCAGCAACAAAATCTCCTCGCTGCAAGCGGTTACTAGCCATGTTTGGAGATCTGTGATCAAAAATCAGCATCTTGATCCAGAAGAAGAGGTCACTTACAGATTCTTTGTAGCTGTTGGACACAGAATTTCTCACCCACCATTACCCAGCAACTATTTTGGACCCACATTGCAATTTTCATATGTGACAATGAAAGCACGAGACTTGGTGGGAGAAGGAGGGCTTGGGAAGTTTGCTTTGGAGATGAACAAGATAGTATCATCATACACAAGCGAAAAGATCACGACGGACTTTGAAGATTGGGCACGAAATCCAAGGATGCCTCCAAAGAGAGAGAGTGGCACAATTGGGAAGTTTATGGGAACTAGTGGCAGCCCAAGGGCCAACTTTTACCCAATTGATTTTGGCTGGGGAAAACCAGTGGCAGTTCATAGTGGCCTTCCCAATCCAAAGAATTGGAAGCTAGTTTTTGATGCTGGAGTAGATGAAGGTAGCTTTGACATTGAGCTTTATGCTTCCTTTGAGATGCTGGAAGCTTTAGCAAGGGACCCTGAGTTCATGAATGTGGTGTCGCCAATGCCACTACCATCGCCAGTGACAGGGATATCCAATAAACTAGCACAAGCTCGGCTGTGA 1476 0.4512 MVAIRVVSTATIQARSQVNYGDSPEEIELNPWDLQFLLSEYAQKGILFRKPILSSSTCSGSSSSSDYTHKTIQHLKDSLSSTLDFFRPLVGRLVIVPHGGDDDTFSIFVSCNNTGASFVHAIAENTAISDIVEPTYVPPFVHSFFPLYRSKNIEGTQIPLLAVQVTELVDGIFMACSINHCLADAKPFMDFVFAWANISRNGLNHIASTSKLASFDRWFPPGNIPRPIRIPFREIKDTNLNTPIDSNQPFPFSQRFFHFKREKIVELREKAKSEIEDGAIVSNKISSLQAVTSHVWRSVIKNQHLDPEEEVTYRFFVAVGHRISHPPLPSNYFGPTLQFSYVTMKARDLVGEGGLGKFALEMNKIVSSYTSEKITTDFEDWARNPRMPPKRESGTIGKFMGTSGSPRANFYPIDFGWGKPVAVHSGLPNPKNWKLVFDAGVDEGSFDIELYASFEMLEALARDPEFMNVVSPMPLPSPVTGISNKLAQARL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2363 491 Pfam Transferase family 26 467 - -
Prci10g2363 491 Gene3D - 1 225 IPR023213 -
Prci10g2363 491 Gene3D - 234 462 IPR023213 -
Prci10g2363 491 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2363 Prci-Chr10 30697724 30699604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2363 73 462 Monolignol Biosynthesis Gene Families AT5G48930 24.814 2.97e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2363 - - pcin:129321848 962.6