Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2356 ATGGACTTAGGCTCAAATTATGATGTGCGAGTTGTAGGGATTGGTGGGATGGGGGGAGTAGGGAAGACAGCTCTTGCCAAAGATGTCTTTAAAAAAATCTCCCACCTTTTTTATTCTGCCTATTTCATCTCCACTCCAACTACCACTCAAGATTATCCTCCAAGTCAATCCATATTAAAGGAGGCATTTCTTCAGATAGCTTTGCCAAAAGAATTTCAACCTTCACGTTTAAAAAGCCCAAGACTCCAGAGGATGCTTGTTGTTTTTGATGATATTGAGTGCTCGAAACATTTTGATGGAGGATGGATTAGACGGTTGTTTGGAGGAGGAAGTAGAATTATCATAACAAGCAGAGATGAGGGACTACTCCTTAGACATCTTGGAGTAGATGAGATTCACAAGGTAGAACTATTGAATCAAAATGAAGCTCGTCGACTTTTCAGCAAAATTGTTTTCAAAAGTGATAAACCAATGATAGTTTATGAGGAGCTGACCCTCAAAGCACTTAAATATGCTGATGGTCTTCCATTAGCTATTCAATCAGTAGGTTCATCGCTTGTTGATCTAAGTGTCTCAGAGTGGAAAAGTGTGTTGACCAAACTTCAAACAGTTCCTGACCCTTCAGTACTTGCAGTGCTTAAGAAAAGTTTCGATGGACTCACAGATTTGCAAAAGAATGCTTTCTTGGATATTGCATGTTGTTTTACAGGACAAAAGATTGATTATATCAAGGGAATTTTATTTTGTCGATATCTTTTTAGATCTTTTCGTGATATGATAATCGAAAGTCTTATAGAAATGTCACTAATAAACAGATCAAGTCAAAAAATAAAAATACATCGTATCCTACAACAATTAGCAAAATTAACTGTTCAACATGAATCTCCTGGACCTGGAAAGCGGAGTAGGATATGGAATTATGAAGATTTTCGTCATATCATGGAGACAAATACTGGAACTGATCGTGTTCAAATCATAGTAGTCTCAAATGATGAAGAACATCCACAGGGGACAACATTGAACATAGATGGTTTATCAAAATTGAGGAAACTCAAAATCCTTATATTCCACAATGTGAAATTTTCAGGAAATCTCTATGATCTTTCTAACAACTTGAAATATCTTTCTTGGCATAAGTATCCACTTAATTATTTGCCATCAAATTTTAAGCCAAAAAGGCTTGTGCAATTGATCATGCCATACAGCAGCATAACACAACTATGGAGAGATGAAAAGAAAGAGATGAAGTGGCTGGAGAACTTGAACCTCCGTGGCTCTAAAGATTTGATGAAGATACCTCATTTTCAATTGCTTCAATGTCTTGAGAGGTTAGACTTGGAAGGATGTACTTCATTAGTGCAGCTTCATCCTTCTATTGCGTATCTGAAATGGCTTAAGTTTTTGAATTTGAGGAACTGCACAAATCTAGAAAGTATTCCAAATGAATTATTTCGCAAAAGCTCTCTTGAATTTCTAAATCTGGCTGGCTGCTCCAAATTTGCCCAAAGTTTGAGGTTCAAGAGAGTAATATTAAGTTGGTCTTATGTTAGACTTATGGGGCTTTAA 1566 0.3653 MDLGSNYDVRVVGIGGMGGVGKTALAKDVFKKISHLFYSAYFISTPTTTQDYPPSQSILKEAFLQIALPKEFQPSRLKSPRLQRMLVVFDDIECSKHFDGGWIRRLFGGGSRIIITSRDEGLLLRHLGVDEIHKVELLNQNEARRLFSKIVFKSDKPMIVYEELTLKALKYADGLPLAIQSVGSSLVDLSVSEWKSVLTKLQTVPDPSVLAVLKKSFDGLTDLQKNAFLDIACCFTGQKIDYIKGILFCRYLFRSFRDMIIESLIEMSLINRSSQKIKIHRILQQLAKLTVQHESPGPGKRSRIWNYEDFRHIMETNTGTDRVQIIVVSNDEEHPQGTTLNIDGLSKLRKLKILIFHNVKFSGNLYDLSNNLKYLSWHKYPLNYLPSNFKPKRLVQLIMPYSSITQLWRDEKKEMKWLENLNLRGSKDLMKIPHFQLLQCLERLDLEGCTSLVQLHPSIAYLKWLKFLNLRNCTNLESIPNELFRKSSLEFLNLAGCSKFAQSLRFKRVILSWSYVRLMGL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2356 521 Gene3D - 1 127 IPR027417 -
Prci10g2356 521 PRINTS Disease resistance protein signature 79 93 - -
Prci10g2356 521 PRINTS Disease resistance protein signature 172 186 - -
Prci10g2356 521 PRINTS Disease resistance protein signature 436 452 - -
Prci10g2356 521 PRINTS Disease resistance protein signature 11 26 - -
Prci10g2356 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 231 IPR027417 -
Prci10g2356 521 SUPERFAMILY L domain-like 334 498 - -
Prci10g2356 521 Gene3D Ribonuclease Inhibitor 313 510 IPR032675 -
Prci10g2356 521 SUPERFAMILY "Winged helix" DNA-binding domain 209 314 IPR036390 -
Prci10g2356 521 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 503 IPR044974 GO:0006952
Prci10g2356 521 Pfam NB-ARC domain 7 203 IPR002182 GO:0043531
Prci10g2356 521 Gene3D - 137 221 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2356 Prci-Chr10 30603901 30610753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2356 8 496 WRKY Transcription Factor Family AT5G45050 33.141 4.27e-65 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2356 - - pcin:129321206 830.861