Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2352 ATGTTCACTTCCAATAAACGATTGGTGGTTAAAGATAAGAGAGATCAGCCTCGGGTTATTGGTAATATTGTTGATAAATCTCTTGACATTTTGTGGAAAAAGCGTGGCCTGATATCATTGCTAAACCATCTCGAACCACTTGCAAAGGAAATAGATAAATCAGGAGAAATAGCTACAGTCGGGATAGGATATCGCCATGTACAAAAACTAATTGAGCTTCTGGACATTGGTTCAAAGGTTGATGTGCGAGCTGTAGGGATTAGTGGGATGGGGGGAGTAGGGAAGACAGCTCTTGCTGGAGATGTGTTTAACAAAATCTCCCACCTTTTTGATTCTGCCTATTTCATCTCCAGTCCAAATACCAGTCAATTTGACTGCCCTAATCAATACATGTTAAAAGAGGCATTTCTGCGGATAGCATTCCCAGAACAATTTGAACCTGAATATTCTGAAAGCCTAAGACTCTATAGAATGCTTGTTGTTTTTGATGATGTAGGTTACTGCAAACATTTTTGTAAAGGATGGATTAGAGGGTTGTTTGGAGGAGGAAGTAGAATTATCATAACAGGCAGAGATGAGGGACTCCTTAGAGAGCTTGGAGTTGATGAAATTCACAAGGTGGAACTATTGAATCAAAATGAAGCTCTTCGGCTTTTCTGCAAAATTGTTTTCAGAAGTGATGAACCAATGAGAGGTTATGAGGAGCTGACCGTTGATGCACTTAGATATGTCGATGGCCTTCCATTAGCTATTAAATCAGTCGGTTCATCGTTGGTTGGTCTAAGTGTCTCAAAGTGGAAAAGTGTGTTGACCAAACTGCAACGGTTCCTGACTTTTCAGTACTCCTGGAACTTAAGAAAAGTTTTGATGGACTCACTTATGAGCAGAAGAATGCTTTCTTGGATATTGCATGTTGTTTTGCAGGACAAAAGATTGATTACATCAAGGGAATTTTACGCACTCGATATTTTGATTATATTGTTGAGACAATAG 993 0.3927 MFTSNKRLVVKDKRDQPRVIGNIVDKSLDILWKKRGLISLLNHLEPLAKEIDKSGEIATVGIGYRHVQKLIELLDIGSKVDVRAVGISGMGGVGKTALAGDVFNKISHLFDSAYFISSPNTSQFDCPNQYMLKEAFLRIAFPEQFEPEYSESLRLYRMLVVFDDVGYCKHFCKGWIRGLFGGGSRIIITGRDEGLLRELGVDEIHKVELLNQNEALRLFCKIVFRSDEPMRGYEELTVDALRYVDGLPLAIKSVGSSLVGLSVSKWKSVLTKLQRFLTFQYSWNLRKVLMDSLMSRRMLSWILHVVLQDKRLITSREFYALDILIILLRQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2352 330 PRINTS Disease resistance protein signature 152 166 - -
Prci10g2352 330 PRINTS Disease resistance protein signature 84 99 - -
Prci10g2352 330 PRINTS Disease resistance protein signature 244 258 - -
Prci10g2352 330 Pfam NB-ARC domain 66 278 IPR002182 GO:0043531
Prci10g2352 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 289 IPR027417 -
Prci10g2352 330 Gene3D - 209 288 IPR042197 -
Prci10g2352 330 Gene3D - 50 204 IPR027417 -
Prci10g2352 330 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 283 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2352 Prci-Chr10 30527206 30532998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2352 69 260 WRKY Transcription Factor Family AT5G45050 32.381 2.68e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2352 - - pcin:129321208 640.573