Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2348 ATGGCTTCTTCTTCCTCTTCAAAGAGGATCTGGAAATATGATGTGGCTATAAGTTACAATGATATGGAAACTGTCTCGTTTTACACAATTCTTTGCCGTAATTTAGAAAAAGAAGGTTTCAAAATCGGCATCAGGAGCTCATTGCCTAACTCATTAGAAATAATTGGAGAATCCCAGATTTATATAGCTGTCTTCTCACAAAGATATGCTTTCTCACCAAGTTGCTTGGACGAACTAGCAGTAATGTTTGAGTGCATGAAGGGATCGGAGCATAAATTTCTGCCAATTTTCTTCAACGTCGATCCGTCTACAGTGAAAACATGGCTAGCTCCATTTCAGACACTACTGGATCAACGCCCAGATTTGGTCATACAAAACAGGGAAGATCAAAAACGAGTTATTGGCAAAATAGTAGTGGAGGCAAAGAAACTTTTGGTCGAAGAGACATTCGCAATGGATGTCCGTAGAAGTGTTGGGTCGTCATCCAAGGGGATATGGCCATGGAGCTGTGATGTTGTTGTATTGAATTTCATAACTGAGGACAATCGCTCATTTATTGAAGACCTTCGAAACGCTCTAAATAGAAATGGTCTGGTAATGGCTTCACGAGAGTCCATTGCTCAAGCTCCCATGGACGCATGCAAGCTTCGTGTTTTTATCATCTCAAAAAACTATGAGTCCCAAACACGCTGCTTGCAGGAACTGAACTTAGATGGATGCATATTTCTGCCAATTTTTTTGGAGGCGGATCCCTTTCAAGTACGTAGCGATAGTTCTTTTGAACTGGAACAAATGTTGGAGCTATGTTCATTTTCAATAAACGATTTGGTGGTTCAAGATATGAGAGATCAACCTCGAGTTATTCGTAATATTCTTGAGAAATACATCGACTACATTTTGGGTGAGAAGCATGATCGGATATCAAGGCTAAACCATATCGAAGCACTTGCAAAGGAAATAGATAAATCAGGAGAAATAGCTACCGTAGGGATAGGAAATCGTCGTGTTGAAAAGTTAATTGAGTTTCTGGACTTAGGCTCAAAGGAAGATGTGCGAATCGTAGGGATTAGTGGGGTGGGGGAAGTAGGAAAGACAACTCTTGCCGGAGATGTGTTTAACAAAATCTCTCACCTTTTTGATTCTGCCTATTTCATCGCAAGTCCAAGTACCAGTCAAGTTGACTACCCTAATCAATCCATATTAATAGAGGCATTTCTCCGGATAGCTTTGCCAAAAGAATTTGAACCTAATAAATACTTAAAAAGCCTAAGACTCCATAGGATGCTTGTTGTTTTTGATGATGTAGAGCACTGGAAACCTTTAGATGAAGGATGGACTAGAAGGTTGTTTGGAGGAGGAAGTAGAATTATCATAACATGCAGAGATGAGAGAATCCTTAGAAAGCTTGGAGTAGATGAAATCCACAAGGTGGAACTATCGAATCAAAATGAAGCTCTTCAACTTTTTAGCAAAATTGTTTTCCAAACTGATAAACCAATGAGAAGTTATGAGGAGCTGACCCTTGAAGCACTTAAATATGCTGATGGCCTTCCATTAGCTATTAAATCAGTAGGTTCATCACTGGTTGGTCTAAGTGTCTCAGAGTGGAAAAGTATGTTGACCAAACTGCAAACAGTTCCTGACCCTTTAGTACTCATGGTTCTTCAAAAGAGTTTTGATGGACTCACAGATAAACAAAAAGAATGCTTTCTTGGATATTGCATGTTGTTTTGTAGGACAGAAGATTGA 1749 0.3945 MASSSSSKRIWKYDVAISYNDMETVSFYTILCRNLEKEGFKIGIRSSLPNSLEIIGESQIYIAVFSQRYAFSPSCLDELAVMFECMKGSEHKFLPIFFNVDPSTVKTWLAPFQTLLDQRPDLVIQNREDQKRVIGKIVVEAKKLLVEETFAMDVRRSVGSSSKGIWPWSCDVVVLNFITEDNRSFIEDLRNALNRNGLVMASRESIAQAPMDACKLRVFIISKNYESQTRCLQELNLDGCIFLPIFLEADPFQVRSDSSFELEQMLELCSFSINDLVVQDMRDQPRVIRNILEKYIDYILGEKHDRISRLNHIEALAKEIDKSGEIATVGIGNRRVEKLIEFLDLGSKEDVRIVGISGVGEVGKTTLAGDVFNKISHLFDSAYFIASPSTSQVDYPNQSILIEAFLRIALPKEFEPNKYLKSLRLHRMLVVFDDVEHWKPLDEGWTRRLFGGGSRIIITCRDERILRKLGVDEIHKVELSNQNEALQLFSKIVFQTDKPMRSYEELTLEALKYADGLPLAIKSVGSSLVGLSVSEWKSMLTKLQTVPDPLVLMVLQKSFDGLTDKQKECFLGYCMLFCRTED 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2348 582 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 141 IPR044974 GO:0006952
Prci10g2348 582 SMART till_3 12 142 IPR000157 GO:0007165
Prci10g2348 582 Gene3D - 480 563 IPR042197 -
Prci10g2348 582 Pfam TIR domain 52 107 IPR000157 GO:0007165
Prci10g2348 582 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 128 IPR035897 -
Prci10g2348 582 Gene3D - 167 312 IPR035897 -
Prci10g2348 582 Gene3D - 313 476 IPR027417 -
Prci10g2348 582 Gene3D - 5 148 IPR035897 -
Prci10g2348 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 571 IPR027417 -
Prci10g2348 582 PRINTS Disease resistance protein signature 422 436 - -
Prci10g2348 582 PRINTS Disease resistance protein signature 514 528 - -
Prci10g2348 582 PRINTS Disease resistance protein signature 353 368 - -
Prci10g2348 582 SUPERFAMILY Toll/Interleukin receptor TIR domain 175 294 IPR035897 -
Prci10g2348 582 Pfam NB-ARC domain 335 545 IPR002182 GO:0043531
Prci10g2348 582 ProSiteProfiles TIR domain profile. 11 145 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2348 Prci-Chr10 30506215 30511001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2348 338 577 WRKY Transcription Factor Family AT5G45050 33.068 1.17e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2348 - - pcin:129284409 1140.18