Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2344 ATGGATTTCCAGAGCAGACTATCTCCTTCTTCTTCGATCTGGAAATATGATGTGACTTTAACTTGCTGTGGTGACTTACCTTACGATTTTTATCCATGGCTTTGGAAAAATCTACTAAAAGAAGGTTTAAGAACCCGAAATTGTTGGTACGATCGCAAAGTCTTTTTTATCGATCAATGGTACGAGCCACTCAAAGAAATGAAGGAATCCCAGATTTATATGGTCGTCTTCTCAAAAACATATGCTAAAGCCGATACAGATTGCTTGAGGGACCTGGCATCAATGTTTGAGTGCATGAAGGTTTCATCGCGGCGACACAGTTTTCTGCCAATTTTCTTTGAGGTCGATCCCTCTCAAGTCAAAACATGGCTAGCTCCGTATGAGGCACTACTGAGCCATAGCCAAGATTTGGTCATACGAAATAATTGTCAGACGGATTTTCAGAGCAAGCCGCCGCCCTCCTCCTCCTCCGAGTGGATATGGCCATGGCCATGTGATGTGTTTATAAGCTTTGATACTGAGTCTGACGACTCTTGCTCTTTCGTTGAATTCCTTTCGCATGCTCTTATCAGCAATGGTTTCATTACCGCTTCTTCAAATTCCTTTGCTCGAGGACCGTTGGACAAATATGAGCTTTATATGGTTGTCCTTACAAAAAGCTATATTTGCTCAACACGATCCTTGCAGGAACTGGCAAGGATGGTAGCTCAGTGCATCGACTCACCTGTACGCAAATTTGATACTGATCCACCTCAGCAGATACTCGTGCCGATCTTCTTCGGAATCCAGCCCTTTCAAGTAACTGATATTGATAGCTTCTTCCAGAATAGCCGCTTTCTTGAACATATAAAACACTTGGAACTAAATGTAGACAAAGTAATGACACTATTGACCCAACGCCAAGATTTGGTAGCACCACATGATCATCTAAAAGATCAAGCGCGATTTATTAGTAAAATTGTTGACAAGACAATTAATATGTATGATGGCTATTATTGGCAGCCATCGCTTCGCTTTATTGATGGAATTGCCAAGAAAGTTGACATATCAGATGAAATAGCTACAGTAGGGATAGGATCTCATCGAGTATCAAAATTAATAGAGCTTCTGGTTTTAGGGTCAACAGGTTTTGTTCGAAGTGTAGGGATCAGTGGGATGGGTGGAATAGGGAAGACAGCTCTGGCCGGAGATATCTTTAACAAGATCTCTCACCATTTTGATTCTACCTATTTCCTCACTAATCTGGATACACATTATGCCTCCAAGTTCCTTCCAGAAGTACTTCTTCGAATAACTCTAGGAGAAGAATATGTACTTTGTGTACACAATATAGAAACTAGTCTGAGAAACCATAGGATTCTTGTAGTCTTAGATGATGTTGATGACCATGAATCATTGAAAGAGTTTTTGATTGGATCACGTGACTGCTTCGGAGGAGGAAGTAGAATTATCATAACAAGTAGAGATGAGCGAGTCCTTGGAGAGCTTGGAGTAGATGAAATTCACAAGGTTAAACTATTGAATCAAAATGAAGCTCTTCGACTTCTCTGCAAAACAGTTTTCAATTGTAATTTTCCAATGAGAGGTTATGATAAGGTGGTCCTGGATGCCCTCAAATATGCCGATGGTCTTCCATTAGCAATCAGATCATTAGGTTCGTTGTTGCGAGATCGAAGCGTCTCAGAATGGCAGAGAGAGTTGGAAAAGTTGGAAATGGTTCCTGATTCTTCAGTACTCAGTGTTCTTAGAAAAAGTTTTGATAAACTCGATGGTATAGAAAAGGACATGTTTTTGGATATTGCTTGCTGTTTTGCTGGAGAGGAGATTGATTATGTGAAGAAAATTCTTGGGATCCAGTATAAATTACCTTTGGTGGAAACGAGGATCGGCTTTCTTATTGATAAGTCACTGATAAACGTCTCAGGTCTTAGAATAAAAATGCATTATATGCTGCAACAGTTGGGAAAAGACATCGTTCGACGAGAATCAACTAGACCTGGAGAGAGGAGTAGGGTATGGCGATTTGAAGATTTTTGTCATGTTATGGAGGCAAATACCGGAACTGAGTATGTCAAAGTCATAGTGCTTTCAAATCAAGAATATCCGCGGAGGACGACATCGATAAGCATCAATGGTTTGTCAAAAATGAATGGACTTAGAGTCCTTATATTTCATAACTTGCACTTTTGCAGGAAGCCTCAGTCGTCTGGCTGA 2214 0.4047 MDFQSRLSPSSSIWKYDVTLTCCGDLPYDFYPWLWKNLLKEGLRTRNCWYDRKVFFIDQWYEPLKEMKESQIYMVVFSKTYAKADTDCLRDLASMFECMKVSSRRHSFLPIFFEVDPSQVKTWLAPYEALLSHSQDLVIRNNCQTDFQSKPPPSSSSEWIWPWPCDVFISFDTESDDSCSFVEFLSHALISNGFITASSNSFARGPLDKYELYMVVLTKSYICSTRSLQELARMVAQCIDSPVRKFDTDPPQQILVPIFFGIQPFQVTDIDSFFQNSRFLEHIKHLELNVDKVMTLLTQRQDLVAPHDHLKDQARFISKIVDKTINMYDGYYWQPSLRFIDGIAKKVDISDEIATVGIGSHRVSKLIELLVLGSTGFVRSVGISGMGGIGKTALAGDIFNKISHHFDSTYFLTNLDTHYASKFLPEVLLRITLGEEYVLCVHNIETSLRNHRILVVLDDVDDHESLKEFLIGSRDCFGGGSRIIITSRDERVLGELGVDEIHKVKLLNQNEALRLLCKTVFNCNFPMRGYDKVVLDALKYADGLPLAIRSLGSLLRDRSVSEWQRELEKLEMVPDSSVLSVLRKSFDKLDGIEKDMFLDIACCFAGEEIDYVKKILGIQYKLPLVETRIGFLIDKSLINVSGLRIKMHYMLQQLGKDIVRRESTRPGERSRVWRFEDFCHVMEANTGTEYVKVIVLSNQEYPRRTTSISINGLSKMNGLRVLIFHNLHFCRKPQSSG 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2344 737 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 121 IPR044974 GO:0006952
Prci10g2344 737 SUPERFAMILY "Winged helix" DNA-binding domain 577 682 IPR036390 -
Prci10g2344 737 ProSiteProfiles TIR domain profile. 14 168 IPR000157 GO:0007165
Prci10g2344 737 Gene3D - 162 330 IPR035897 -
Prci10g2344 737 SUPERFAMILY Toll/Interleukin receptor TIR domain 155 275 IPR035897 -
Prci10g2344 737 Gene3D - 340 499 IPR027417 -
Prci10g2344 737 Gene3D - 506 590 IPR042197 -
Prci10g2344 737 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 142 IPR035897 -
Prci10g2344 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 600 IPR027417 -
Prci10g2344 737 Pfam TIR domain 34 121 IPR000157 GO:0007165
Prci10g2344 737 Gene3D - 9 148 IPR035897 -
Prci10g2344 737 Pfam NB-ARC domain 363 573 IPR002182 GO:0043531
Prci10g2344 737 PRINTS Disease resistance protein signature 380 395 - -
Prci10g2344 737 PRINTS Disease resistance protein signature 447 461 - -
Prci10g2344 737 PRINTS Disease resistance protein signature 541 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2344 Prci-Chr10 30467315 30472328 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2344 364 673 WRKY Transcription Factor Family AT5G45050 35.938 1.32e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2344 - - pcin:129321910 1471.06