Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2343 ATGGATTTCCAGAGCAGACTATCTCCTTCTTCTTCGATCTGGAAATATGATGTGACTTTAACTTGCTGTGGTGACTTACCTTACGATTTTTATCCATGGCTTTGGAAAAATCTACTAAAAGAAGGTTTAAGAACCCGAAATTGTTGGTACGATCGCAAAGTCTTTTTTATCGATCAATGGTACGAGCCACTCAAAGAAATGAAGGAATCCCAGATTTATATGGTCGTCTTCTCAAAAACATATGCTAAAGCCGATACAGATTGCTTGAGGGACCTGGCATCAATGTTTGAGTGCATGAAGGTTTCATCGCGGCGACACAGTTTTCTGCCAATTTTCTTTGAGGTCGATCCCTCTCAAGTCAAAACATGGCTAGCTCCGTATGAGGCACTACTGAGCCATAGCCAAGATTTGGTCATACGAAATAACGGAGATCAAACTCGAGTTATGAAAGAAATAATTGTGAAGGCAAAACAAATATTGCTGGCCAATGAAAGAGATACTTGTCAGACGGATTTTCAGAGCAAGCCGCCGCCCTCCTCCTCCTCCGAGTGGATATGGCCATGGCCATGTGATGTGTTTATAAGCTTTGATACTGAGTCTGACGACTCTTGCTCTTTCGTTGAATTCCTTTCGCATGCTCTTATCAGCAATGGTTTCATTACCGCTTCTTCAAATTCCTTTGCTCGAGGACCGTTGGACAAATATGAGCTTTATATGGTTGTCCTTACAAAAAGCTATATTTGCTCAACACGATCCTTGCAGGAACTGGCAAGGATGGTAGCTCAGTGCATCGACTCACCTGTACGCAAATTTGATACTGATCCACCTCAGCAGATACTCGTGCCGATCTTCTTCGGAATCCAGCCCTTTCAAGTAACTGATATTGATAGCTTCTTCCAGAATAGCCGCTTTCTTGAACATATAAAACACTTGGAACTAAATGTAGACAAAGTAATGACACTATTGACCCAACGCCAAGATTTGGTAGCACCACATGATCATCTAAAAGATCAAGCGCGATTTATTAGTAAAATTGTTGACAAGACAATTAATATGTATGATGGCTATTATTGGCAGCCATCGCTTCGCTTTATTGATGGAATTGCCAAGAAAGTTGACATATCAGATGAAATAGCTACAGTAGGGATAGGATCTCATCGAGTATCAAAATTAATAGAGCTTCTGGTTTTAGGGTCAACAGGTTTTGTTCGAAGTGTAGGGATCAGTGGGATGGGTGGAATAGGGAAGACAGCTCTGGCCGGAGATATCTTTAACAAGATCTCTCACCATTTTGATTCTACCTATTTCCTCACTAATCTGGATACACATTATGCCTCCAAGTTCCTTCCAGAAGTACTTCTTCGAATAACTCTAGGAGAAGAATATGTACTTTGTGTACACAATATAGAAACTAGTCTGAGAAACCATAGGATTCTTGTAGTCTTAGATGATGTTGATGACCATGAATCATTGAAAGAGTTTTTGATTGGATCACGTGACTGCTTCGGAGGAGGAAGTAGAATTATCATAACAAGTAGAGATGAGCGAGTCCTTGGAGAGCTTGGAGTAGATGAAATTCACAAGGTTAAACTATTGAATCAAAATGAAGCTCTTCGACTTCTCTGCAAAACAGTTTTCAATTGTAATTTTCCAATGAGAGGTTATGATAAGGTGGTCCTGGATGCCCTCAAATATGCCGATGGTCTTCCATTAGCAATCAGATCATTAGGTTCGTTGTTGCGAGATCGAAGCGTCTCAGAATGGCAGAGAGAGTTGGAAAAGTTGGAAATGGTTCCTGATTCTTCAGTACTCAGTGTTCTTAGAAAAAGTTTTGATAAACTCGATGGTATAGAAAAGGACATGTTTTTGGATATTGCTTGCTGTTTTGCTGGAGAGGAGATTGATTATGTGAAGAAAATTCTTGGGATCCAGTATAAATTACCTTTGGTGGAAACGAGGATCGGCTTTCTTATTGATAAGTCACTGATAAACGTCTCAGGTCTTAGAATAAAAATGCATTATATGCTGCAACAGTTGGGAAAAGACATCGTTCGACGAGAATCAACTAGACCTGGAGAGAGGAGTAGGGTATGGCGATTTGAAGATTTTTGTCATGTTATGGAGGCAAATACCGGAACTGAGTATGTCAAAGTCATAGTGCTTTCAAATCAAGAATATCCGCGGAGGACGACATCGATAAGCATCAATGGTTTGTCAAAAATGAATGGACTTAGAGTCCTTATATTTCATAACTTGCACTTTTGCAGGAAGCCTCAGTCGTCTGGCTGA 2289 0.4032 MDFQSRLSPSSSIWKYDVTLTCCGDLPYDFYPWLWKNLLKEGLRTRNCWYDRKVFFIDQWYEPLKEMKESQIYMVVFSKTYAKADTDCLRDLASMFECMKVSSRRHSFLPIFFEVDPSQVKTWLAPYEALLSHSQDLVIRNNGDQTRVMKEIIVKAKQILLANERDTCQTDFQSKPPPSSSSEWIWPWPCDVFISFDTESDDSCSFVEFLSHALISNGFITASSNSFARGPLDKYELYMVVLTKSYICSTRSLQELARMVAQCIDSPVRKFDTDPPQQILVPIFFGIQPFQVTDIDSFFQNSRFLEHIKHLELNVDKVMTLLTQRQDLVAPHDHLKDQARFISKIVDKTINMYDGYYWQPSLRFIDGIAKKVDISDEIATVGIGSHRVSKLIELLVLGSTGFVRSVGISGMGGIGKTALAGDIFNKISHHFDSTYFLTNLDTHYASKFLPEVLLRITLGEEYVLCVHNIETSLRNHRILVVLDDVDDHESLKEFLIGSRDCFGGGSRIIITSRDERVLGELGVDEIHKVKLLNQNEALRLLCKTVFNCNFPMRGYDKVVLDALKYADGLPLAIRSLGSLLRDRSVSEWQRELEKLEMVPDSSVLSVLRKSFDKLDGIEKDMFLDIACCFAGEEIDYVKKILGIQYKLPLVETRIGFLIDKSLINVSGLRIKMHYMLQQLGKDIVRRESTRPGERSRVWRFEDFCHVMEANTGTEYVKVIVLSNQEYPRRTTSISINGLSKMNGLRVLIFHNLHFCRKPQSSG 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2343 762 Gene3D - 365 524 IPR027417 -
Prci10g2343 762 Pfam NB-ARC domain 388 598 IPR002182 GO:0043531
Prci10g2343 762 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 146 IPR035897 -
Prci10g2343 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 625 IPR027417 -
Prci10g2343 762 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 123 IPR044974 GO:0006952
Prci10g2343 762 SUPERFAMILY "Winged helix" DNA-binding domain 602 707 IPR036390 -
Prci10g2343 762 Pfam TIR domain 34 121 IPR000157 GO:0007165
Prci10g2343 762 PRINTS Disease resistance protein signature 472 486 - -
Prci10g2343 762 PRINTS Disease resistance protein signature 405 420 - -
Prci10g2343 762 PRINTS Disease resistance protein signature 566 580 - -
Prci10g2343 762 ProSiteProfiles TIR domain profile. 14 161 IPR000157 GO:0007165
Prci10g2343 762 Gene3D - 9 169 IPR035897 -
Prci10g2343 762 SUPERFAMILY Toll/Interleukin receptor TIR domain 180 300 IPR035897 -
Prci10g2343 762 Gene3D - 187 355 IPR035897 -
Prci10g2343 762 Gene3D - 531 615 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2343 Prci-Chr10 30467315 30472328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2343 403 698 WRKY Transcription Factor Family AT5G45050 36.513 2.14e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2343 - - pcin:129321910 1531.15