Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2320 ATGGGAGGTGTACTAGCTATTGGAAGAGATATTGTTTGGGCAAAACAGATCGCAAAGAAGATAGAAAACACAAAACAACTTGTTGAAAGGAATAATTTTGATCCCTTTTCTGTCCCTGGCGAAATTCCAGATATAGAGTATTTTTCTTCTAGAAATTTTGTGTATTTCCAGTCTACAAAGTTGGCTTCAGATGAACTTTTGGCAGGTCTCCAAGATGACGGTACCCACATGATTGGATTGTATGGAATGGGAGGCTCCGGCAAAACAACCTTGGTTAAAGAGGTTGGCAAAGAGGCCAAAAAATCAAAGCTCTTTGATCGAGTCATACTTGCTACCATCTCCCAAAATCCAGATAATAAAAGGATTCAAGATGAAATTGCAGACATGTTAGATTTGGAATTGAAAGAACAAAGTGAAGCTGGAAGAGCAAGACGTTTGTCAATGAGATTGAGTAGTGGGGAAAGGATACTCATGATATTAGATGATGTGTGGGCTAAGATTGATTTAAAGGATATTGGTATTCCTTTTGAAGATTATCATGTGGGCTGCAAGGTCCTTCTTACTACTCGACGTCAGCGAGTATGCATTTTGATGAATTGTGAGAGGAAGATTCCATTGCATCTCTTAGCTGAAGAGGAATCTTGGACATTGCTCAAAAAGCATGCTCGTATTGTAGACAAATCATTACATGGTGTGGCACAAGAAATTGTTGGGGAATGTAAAGGGCTTCCTATTGCAATTCAAGCTGTAGGAGCCTCTTTGAAAGAAAAGTTTATAGAAGAATGGAATGAAGCACTGGCAAGATTGAGGTTTTCAAAACCAATTGATGAGGAACCAGGTGTTAGAGATGCCTTTTCTTGTCTTAAGTTGAGCTATGATTATTTGAAGAGCCATGAAGCCAAGTCACTCTTTTTGATGTGCTCCATGTATCCAGAAGATGCAGATATCTTTGTTGAAGATTTGTTTAGAATTGCAATTGGTTTAGGCATGTGTGAAGAATTGCGTTCACTTGAAGAGGTGAGAAATAAAGTGAATGCATGTATAAATAATCTTGTAGATTCTTGTTTGCTAATGTGGTCTGAGAGAAAGAAAGACCACTCGAGAATGCATGACATAATTCGAGATGTAGCATTGTGGATATCATTCCAAGAAAATCGCACTATTCTAGTGAATCTTGAGAAGGATATGAAGGTGGAAATTATAAATGAATCGATAAAAGATTGTTATGCATTCACTTCTTGGTGTAATCAAACATCTCAATTTCCTCAAATATTAGATGCTCCAAAACTTGAGATTTTGTTGTTTAACAACATAGGTGCATGTGAATTATCAGAAGCAAATTTTAGAGGTATGGCATCACTCAAGGTAATGCAAATCAACTCTAGATATCATGAAGCAGTGGACTTCTCATCACTATCGTACTCTATGAATTTGCTAACTAATCTACAAACTTTGCGCTTGCAATGTTGTCGATTAGGTGATGATTTGTCATGGGTGTTAGGCCTCAAAAGACTTGAAGTTCTTGACTTGAAAGAAAGTTCATTTAAGGAACTTCCACAAGGATTAGAAGAGTTGAGAAAATTGAAGTTGTTGGTTTTGTCTTGGATCAACGAGCAAAGTTTTAAGATAGTGGAGAGATGCACACATCTGGAAGAGTTATATGCTTCACAAATCCGACTAAGTAGAACAACTTTAAAACTTGGTGGATGTTATTCCAAAAATGCCACTTTTCCCATATTACGGAGATATGAACTTGAAATTGGGAACTATCATGAAATTCATAGGCAACATTCTAAAGCCTTAACGGGTTGTCACTCTAAGGTTTTGTCCTTGGGAGAATTAAAAATCTTTGCTTTAACTCCATTTATTATGGATCTTTTACAACGAGCTGAAGCTGTTTGTTTAAATAAACTTGATGGAGGTTTCAAAAATATCGTTCCAGACATCGTTCAGGGTGTTCGAAGGATGAATGAGTTGATTAGCTTGTGGCTTCATTCTTTTTCAAATTTAGAATGTGTTGTTGATGCAACTTCTCATATTGTTGATTTGTTTCAAGCAGAAACTTTGTTTCCAAAGCTAATTAAGTTAAGGTTGGAGTCTTTGAGCAATTTGAAAAAAGTTTGCTGCGGTCCACCTTTGCTTCTCTTCTTCGAGAAATTGCAAGAATTGCATGTATCTCATTGTCCTATGTTAACATCACTCTTCCCAAAGTGTGTTGCCAGAGCTGTGTTGGCGTTACAGAAGCTAACTGTAGAAAGTTGTGGTGAATTGAAGAATATAATAGATGAGGATGGTGATGGTACTATCAATCAAATAATTTCAGCTTCAAACAATTCACATTCGGCGTTCTCACAATTGAAAAGTTTGACCATCCTTGATTGTCATAAGTTAGAATATGTATTCTCAAACTCTTGTGCTCAAGGCCTTGTGCAGTTAGAGGAGGTGTGCATTCAGGGGGCTTCTCAACTAAAATATGCTTTTGGCCAACATGAAGATGAACATCAAGAGTTTCAGATAGAGCTTCCTATTCTGAAATCACTTGAACTTCATGGCTTGAAAAATTTGATTAGCATTTTCCCAAAAAACTATCTTTCGAGTTGCCCATGTTTGAGGAAATTGCGTTGGGTGAGATGTCCAAAATTCAGAGCTTCATGTGTTAACATTATGGTTGGTTCAAATATAAATATGGACAACCAGTTATACAGCAAGGTTTCAGCTCCATTATCGTTTCTAAAGTTAGAGAAACTTGAGGTTAAGGGTTGTAGTGTTGAAGACATTCTATTTCCACTTGAAAGGGATGTTTTTACTGAAACGAATTCCCAAAACAACTTGATCTCACCCTTAGGCACTCTGAGATTGGATAATATGCCAGAGCTAAAGTTTGTTTGGAGTGGTCCAATGGGAACAGTGAGCCTCCAAAATCTTAGAGTATTTACAGTGAGTGGGTGCAACAATTTGAAGATGATTTTCTCCCCTGTAATTCTTAAAAGTATACAACTATTGGAGCGTCTTGAAATATCAGATTGCAATGAATTGGAGGAAATAATGTGCGGTATAGACGTAGGAGATCAACAACAAGGCCCAATGGACGCTCAATCCGTGCAAGTATTCTTTCCAAATCTGAGAGAGCTTCAAGTTTGGAGATGTAGCAAGCTCAAATGCTTATTTTCAATAGCCATAGATTGGAACAATCATTTAAAGAATGTGTTACCCAACTTGAAATCCTTAACTTTGGAACAAGTGCCAAGTCTCCAGGATTTTTGCTACAGTTTATCCTTTTCCAACAATCACCTTTTCCAGCTGTTGGGTTCAAAACTAGAACGCTTGTGGTTAGGAAGTGAGCCTGAGCTATGGGTGACATGGAGAGCTCCTTTACAGATTTCGAACTTTGTCCATCTTCAAGACCTTAGACTGAGTGAATGTAAGGAATTGAAATCTCTATTTGGTGAGGGCTTCCACGGAAGAAGCCTACCAATGTTACAATATCTTAGGATAAGCAAGTGTGAGGAGTTGGAGGACATTCTGAGAGCGGATAATGAATTCCAAACATGCTTTCCTAAATTGGATTACCTCAGAGTTGAGCATTGCAACAAGCTCAAGTATCTTTTCTCAATCTCCTCTCTCACTCCATTGCTTCCCCATTTAGAGACAATATACATATCTGAATGTGCAAAGTTAGAGGAGCTTTTTAGATGCAGCAGTGAAGACACCAGTAACAATGTCAATGAAATCGCGCTTCCAAACTTAACATTCATACATCTAGTGAAATTGCCAAGTCTTGTTGATGTCTGCAATGGGTTCAAGTTATACGCTGTGAACCTTGAACAAATTAGGATGCAAGAATGTCCAAAATTTTCTTCAATCATGGGGGCAACTGGGAGCATAGTCACTCAAATAAAGAGAAAGGACGCAGAGCCTCGTGGGAACAACGACAGTCAAATGCTTGATCAACTCCCATATTTCTTCCCAGAATATTTGACTTTAATGAAATTAGGGTTACAAAAATTAAGTGAGCTAAGCTTCATATGCAGGGCTTTCAGTACTCCCTCCCAAAATTCAAGCTTCCAATATCTTAGATTTTTAACAGTGCATGGATGTGGAAAACTGAAATGCATCTTCTCCTCCTCTGTTTGGGGAAGCCTTCAACATCTGACACAGTTGGAAATTAGAGAATGTGAGGAAGTAGAGGAAATCATGCAAGAGTTGGAAGAAGCTCAGCATGTATCCCACATTTCTTTCCCAAAATTGCGGTGGATAACAGTGGAGGGGTGCCACAAGTTGAAATGCCTTTTCAGGACACCTACAATTGCAATGCTTCTTCCAGAACTAAGTCTCATAGAGGTATCAAAAGCTGCACAAATGGAGGAGCTCTTTTCGCATAATTATAATGGTGATGAAGACACTGTCACTACACAACATATTGTGTTTTCAAATCTCTACTCGTTGAAACTTTCAAAATTGCCAAGCCTCGCTCACTTCTGCAAAGGACTCAACTTAAATGCTCCATACCTTGTTGATGTCCAGATAAATGAATGCCCAAAATTTGACTTTTCCTTTGAGGAACCCACTTCCATAGAAAGCACAGCAGAATGA 4593 0.3817 MGGVLAIGRDIVWAKQIAKKIENTKQLVERNNFDPFSVPGEIPDIEYFSSRNFVYFQSTKLASDELLAGLQDDGTHMIGLYGMGGSGKTTLVKEVGKEAKKSKLFDRVILATISQNPDNKRIQDEIADMLDLELKEQSEAGRARRLSMRLSSGERILMILDDVWAKIDLKDIGIPFEDYHVGCKVLLTTRRQRVCILMNCERKIPLHLLAEEESWTLLKKHARIVDKSLHGVAQEIVGECKGLPIAIQAVGASLKEKFIEEWNEALARLRFSKPIDEEPGVRDAFSCLKLSYDYLKSHEAKSLFLMCSMYPEDADIFVEDLFRIAIGLGMCEELRSLEEVRNKVNACINNLVDSCLLMWSERKKDHSRMHDIIRDVALWISFQENRTILVNLEKDMKVEIINESIKDCYAFTSWCNQTSQFPQILDAPKLEILLFNNIGACELSEANFRGMASLKVMQINSRYHEAVDFSSLSYSMNLLTNLQTLRLQCCRLGDDLSWVLGLKRLEVLDLKESSFKELPQGLEELRKLKLLVLSWINEQSFKIVERCTHLEELYASQIRLSRTTLKLGGCYSKNATFPILRRYELEIGNYHEIHRQHSKALTGCHSKVLSLGELKIFALTPFIMDLLQRAEAVCLNKLDGGFKNIVPDIVQGVRRMNELISLWLHSFSNLECVVDATSHIVDLFQAETLFPKLIKLRLESLSNLKKVCCGPPLLLFFEKLQELHVSHCPMLTSLFPKCVARAVLALQKLTVESCGELKNIIDEDGDGTINQIISASNNSHSAFSQLKSLTILDCHKLEYVFSNSCAQGLVQLEEVCIQGASQLKYAFGQHEDEHQEFQIELPILKSLELHGLKNLISIFPKNYLSSCPCLRKLRWVRCPKFRASCVNIMVGSNINMDNQLYSKVSAPLSFLKLEKLEVKGCSVEDILFPLERDVFTETNSQNNLISPLGTLRLDNMPELKFVWSGPMGTVSLQNLRVFTVSGCNNLKMIFSPVILKSIQLLERLEISDCNELEEIMCGIDVGDQQQGPMDAQSVQVFFPNLRELQVWRCSKLKCLFSIAIDWNNHLKNVLPNLKSLTLEQVPSLQDFCYSLSFSNNHLFQLLGSKLERLWLGSEPELWVTWRAPLQISNFVHLQDLRLSECKELKSLFGEGFHGRSLPMLQYLRISKCEELEDILRADNEFQTCFPKLDYLRVEHCNKLKYLFSISSLTPLLPHLETIYISECAKLEELFRCSSEDTSNNVNEIALPNLTFIHLVKLPSLVDVCNGFKLYAVNLEQIRMQECPKFSSIMGATGSIVTQIKRKDAEPRGNNDSQMLDQLPYFFPEYLTLMKLGLQKLSELSFICRAFSTPSQNSSFQYLRFLTVHGCGKLKCIFSSSVWGSLQHLTQLEIRECEEVEEIMQELEEAQHVSHISFPKLRWITVEGCHKLKCLFRTPTIAMLLPELSLIEVSKAAQMEELFSHNYNGDEDTVTTQHIVFSNLYSLKLSKLPSLAHFCKGLNLNAPYLVDVQINECPKFDFSFEEPTSIESTAE 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2320 1530 SUPERFAMILY RNI-like 910 1093 - -
Prci10g2320 1530 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 900 1088 - -
Prci10g2320 1530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 307 IPR027417 -
Prci10g2320 1530 Coils Coil 1385 1405 - -
Prci10g2320 1530 SUPERFAMILY RNI-like 1068 1288 - -
Prci10g2320 1530 Gene3D - 208 296 IPR042197 -
Prci10g2320 1530 FunFam Probable disease resistance protein At1g61300 42 203 - -
Prci10g2320 1530 Gene3D Ribonuclease Inhibitor 1246 1462 IPR032675 -
Prci10g2320 1530 Gene3D Ribonuclease Inhibitor 1062 1245 IPR032675 -
Prci10g2320 1530 Gene3D Ribonuclease Inhibitor 609 763 IPR032675 -
Prci10g2320 1530 Pfam NB-ARC domain 71 292 IPR002182 GO:0043531
Prci10g2320 1530 SUPERFAMILY L domain-like 366 885 - -
Prci10g2320 1530 SUPERFAMILY RNI-like 1322 1513 - -
Prci10g2320 1530 Gene3D Ribonuclease Inhibitor 368 577 IPR032675 -
Prci10g2320 1530 Gene3D Ribonuclease Inhibitor 776 1061 IPR032675 -
Prci10g2320 1530 Gene3D - 46 204 IPR027417 -
Prci10g2320 1530 PRINTS Disease resistance protein signature 150 164 - -
Prci10g2320 1530 PRINTS Disease resistance protein signature 500 516 - -
Prci10g2320 1530 PRINTS Disease resistance protein signature 240 254 - -
Prci10g2320 1530 PRINTS Disease resistance protein signature 77 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2320 Prci-Chr10 29974443 29984439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2320 78 578 WRKY Transcription Factor Family AT5G45050 24.539 1.27e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2320 - - pcin:129322196 2510.33