Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2274 ATGGACCAGAGCACTTTCTCCGCCCGAACCCGGAAAGCCAGACCCAAGTCTGACCTGTATTCCCCCGTCGTCGTGCACGACGGCGACGGCGACGGCGACGACAGCGGCGGAAACAGCTATGGTAAGCGAGACCAAAGCCGGAGCGGACGGAATGCCAGAAGCTCGGTACCTGAGGACGATCCATATGCAACAATGGTCTACAAAGACAATGGCCATGAAGAAGACGAAGATGACGACTCCTCCCTCCCACCTCTTCTTAAGCGCTTGCCCAAGGACTTCGGTGGTGGAGCCTCGATGGACTACGAAGACGATCCTGACGACGATGCCGGCGATTTTGGCACCATGATCGTTAAGACCGATCGAAGTCGGGAGCGAAATCGTTCTTCGTCGCCCATGGGTTCGACCTGGAATTCTCGGAAGTCTCCTTTGAGGCAGGCAAGTCCAACGGCGGGACTGGGCGGTGGGGATGACGAAGATGATGAGGGTGACGAGGGGTTTTCAACATTCGTCGTACGTAAAACGGCAAGGTCCAGTGAGAGAGAGTCTGTCAGTGGAACCGTAGTGCGTAGGACAAGCGCCGGTGCTGGTGGTGGTGGAACTGTTACTGGCTCGACAATGGAAAGAGCAGTGGCAAGTATGCAGGCATCGGGTGAACTAGGCTTTGGGAAACAGAGGAGGGGGAGCGGGCCTATGCAGAACGACGAGGGTAGGCAGTCAATAGGGACGAAGGTTTCATCGAGTTCGATCCCGGAAAGCGTCACTAGAGAGGATCCTACAACTAAGTACGAATTGCTCAATGAACTTGGGAAGGGATCTTACGGATCAGTTTATAAAGCTAGGGATTTAAAAACCTCAGAGCTTGTCGCTATCAAAGTCATTTCCCTTTCTGAAGGGGAGGAGGGATACGAGGAAATCCGCGGTGAAATTGAGATGTTACAGCAATGTAATCATCCAAACGTGGTCCGCTACCTTGGAAGCTATCAGGGCGAAGAGTATCTTTGGATAGTTATGGAATATTGTGGTGGTGGTAGTGTTGCTGATTTGATGAATGTAACTGAGGAGCCGCTGGATGAGGGTCAGATAGCATATATCTGTAGGGAGGCACTGAAGGGACTTGAGTATTTGCACTCCATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACCAGGACCATCAAGCGAAACACGTTCATTGGAACACCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGGAAGGTAGACGTGTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCAGAGGGCCTTCCTCCAAGATCAGCTGTCCATCCAATGAGGGTTTTGTTTATGATATCCATTGAACCAGCACCAATGCTTGAGGATAAAGAAAAATGGTCTCTACATTTTCACGACTTTGTTGCTAAGTGCCTTACTAAGGAACCTCGTTTACGGCCTACTGCATCAGAGATGTTAAAGCACAAATTCTTTGACAAATGGAAAACTGGATCAACAGCAATGATGCCAAAAATTGAAAAGGCTAGGCAAATCAGGAAATCAATGGCTTTGCAAGCACAAACTCTTGCTCCAGCTGCATTAGAAGATCAGTCAAATGAGCAAAAACTGAATGATGACTATGGAGACACTGTTCCCTCAAGACCTCTTAACGTTGGGGTTCAAGGGGCAGGTGGTCTTTCTTCAGATGGAACTCCGAGGAAGCTGAATAGGTTGGCAAGTGTGGAACTGAGTGAAGGTAACTTTGGTACTGTAGTCGTCCATGAGGATGAGGTTGATACAGCGGCAGTTAGGTCACAGGGTGCAGATAATGCAGATTCCTCTGCTTCCGTCATTAGTGGAACAGGAGGCAGATTGGCTGATTCTCGGGTGGAGAGTCTGAAAGTTGCTGTCTCAAGTGATGCCTCTGTTGGGGGTTTGGGTGCTCATACTAATACCATAAAATCATCTTTATCTCCTGTTAATGACTCAGCTGCTGAAACACAAGCAAGAGGTGATTTTCAAACAGTTGGAGTCAGCAGTGATAGAAGGAATAGTACATTGAAGAATGAAACAGTCAGCAGAAAAGCATTTGCTTTACAGGATAAGCTTTGGTCAATTTATGCAGCTGGTAGTACAGTACCCATTCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTATCGGACAATGTGCTTGGTGGCTTGCAACAAGATTCAACTGGAACTGCTACAGTAGAAGCATTGCAGGAGCTTTTTAGTGGTGATGGACCGTCCAAAAGGGGACGCAGAGGACAAATCGAGATGCCTGTTCCTCCGAGCATCTATCAGCGACTGACATCGAGTTCTACTCTGCTGAATTTGGCACAGGCTCTAGCTTATCACAAGATGTGTTATGAAGATATGCCGCTGCAGGAGCTGCAGGCAACCCAAGAGGAGCAGACCATTCAAAACCTCTGCGACACTCTTCGTACTATTCTTCGCTTGTAG 2544 0.4827 MDQSTFSARTRKARPKSDLYSPVVVHDGDGDGDDSGGNSYGKRDQSRSGRNARSSVPEDDPYATMVYKDNGHEEDEDDDSSLPPLLKRLPKDFGGGASMDYEDDPDDDAGDFGTMIVKTDRSRERNRSSSPMGSTWNSRKSPLRQASPTAGLGGGDDEDDEGDEGFSTFVVRKTARSSERESVSGTVVRRTSAGAGGGGTVTGSTMERAVASMQASGELGFGKQRRGSGPMQNDEGRQSIGTKVSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMXKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLHFHDFVAKCLTKEPRLRPTASEMLKHKFFDKWKTGSTAMMPKIEKARQIRKSMALQAQTLAPAALEDQSNEQKLNDDYGDTVPSRPLNVGVQGAGGLSSDGTPRKLNRLASVELSEGNFGTVVVHEDEVDTAAVRSQGADNADSSASVISGTGGRLADSRVESLKVAVSSDASVGGLGAHTNTIKSSLSPVNDSAEXETQARGDFQTVGVSSDRRNSTLKNETVSRKAFALQDKLWSIYAAGSTVPIPFLRATDISPIALLSDNVLGGLQQDSTGTATVEALQELFSGDGPSKRGRRGQIEMPVPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQELQATQEEQTIQNLCDTLRTILRL 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2274 849 SUPERFAMILY Protein kinase-like (PK-like) 259 517 IPR011009 -
Prci10g2274 849 MobiDBLite consensus disorder prediction 111 127 - -
Prci10g2274 849 MobiDBLite consensus disorder prediction 675 696 - -
Prci10g2274 849 FunFam serine/threonine-protein kinase dst1 isoform X1 259 550 - -
Prci10g2274 849 Pfam Protein kinase domain 262 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2274 849 CDD STKc_MAP4K3_like 261 516 - -
Prci10g2274 849 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 245 558 - -
Prci10g2274 849 ProSiteProfiles Protein kinase domain profile. 262 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2274 849 FunFam Aurora kinase A 254 343 - -
Prci10g2274 849 Gene3D Transferase(Phosphotransferase) domain 1 258 555 - -
Prci10g2274 849 SMART serkin_6 262 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2274 849 MobiDBLite consensus disorder prediction 231 255 - -
Prci10g2274 849 MobiDBLite consensus disorder prediction 1 258 - -
Prci10g2274 849 ProSitePatterns Protein kinases ATP-binding region signature. 268 291 IPR017441 GO:0005524
Prci10g2274 849 MobiDBLite consensus disorder prediction 128 145 - -
Prci10g2274 849 MobiDBLite consensus disorder prediction 547 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2274 Prci-Chr10 29268602 29296072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2274 7 849 MAP Kinase Kinase Kinase Kinase AT1G69220 59.676 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Prci10g2274 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2274 - - gmx:100804995 1159.82