Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2235 ATGGATCAGAGCACTTTCTCCGCCCGAACCCGGAAAGCCAGACCCAAGTCTGACCTGTATTCCACCGTCGTCGTGCACGACGGCGACGGCGACGACAGCGGCGGAAACAGCTATGGTAAGCGAGACCAAAGCCGGAGCGGACGGAATGCCAGAAGCTCGGTACCTGAGGACGATACATATGCAACAATGGTCTACAAAGACAATGGCCATGAAGAAGACGAAGATGACGACTCCTCCCTCCCACCTCTTCTTAAGCGCCTGCCCAAGGACTTCGGTGGTGGAGCCTCGATGGACTACGAAGACGATCCTGACGACGATGCCGGCGATTTTGGCACCATGATCGTTAAGACCGATCGAAGTCGGGAGCGAAATCGTTCTTCGTCGCCCATGGGTTCGACCTGGAATTCTCGGAAGTCTCCTTTGAGGCAGGCAAGTCCAACGACGGGACTGGGCGGTGGGGATGACGAAGATGATGAGGGTGACGAGGGGTTTTCAACATTCGTCGTACGTAAAACGGCAAGTTCCAGTGAGAGAGAGTCTGTCAGTGGAACCGTAGTGCGTAGGACAAGCGGCGGTGCTGGTGGTGGTGGAATTGTTACTGGCTCGACAATGGAAAGAGCAGTGGCAAGTATGCAGGCATCGGGTGAACTAGGCTTTGGGAAACAGAGGAGGGGAAGCGGGCCTATGCAGAACGACGAGGGTAGGCAGTCGATAGGGACGAAGGTTTCATCGAGTTCGATCCCGGAAAGCGTCACAAGAGAGGATCCTACAACTAAGTACGAATTGCTCAATGAACTTGGGAAGGGATCTTACGGATCAGTTTATAAAGCTAGGGATTTAAAAACCTCAGAGCTTGTCGCTATCAAAGTCATTTCCCTTTCTGAAGGGGAGGAGGGATACGAGGAAATCCGCGGTGAAATTGAGATGTTACAGCAATGTAATCATCCAAACGTGGTCCGCTACCTTGGAAGCTATCAGGGCGAAGAGTATCTTTGGATAGTTATGGAATATTGTGGTGGTGGTAGTGTTGCTGATCTGATGAATGTGACTGAGGAGCCGCTGGATGAGGGTCAGATAGCATATATCTGTAGGGAGGCACTGAAGGGACTTGAGTATTTGCACTCCATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACCAGGACCATGTCAAAGCGAAACACGTTCATTGGAACACCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGGAAGGTAGACGTATGGGCTCTTGGTGTGTCTGCAATTGAAATGGCAGAGGGCCTTCCTCCAAGATCAGCTGTCCATCCAATGAGGGTTTTGTTTATGATATCCATTGAACCAGCACCGATGCTTGAGGATAAAGAAAAATGGTCTCTACATTTTCACGACTTTGTTGCTAAGTGCCTTACTAAGGAACCTCGTTTACGCCCTACTGCATCAGAGATGTTAAAGCACAAATTCTTTGACAAATGGAAAACTGGATCAATGGCAATGATGCCAAAAATTGAAAAGGCTAGGCAAATCAGGAAATCAATGGCTTTGCAAGCACAAACTCTTGCTCCAGCTGCATTAGAAGATCAGTCAAATGAGCAAAAACTGAATGATGACTATGGAGACACTGTTCCCTCAAGACCTCTTAACGTTGGGGTTCAAGGGGCAGGTGGTCTTTCTTCAGATGGAACTCTGAGGAAGCTGAATAGGTTGGCAAGTGTGGAACTGAGTGAAGGTAACTTTGGTACTGTAGTCGTCCATGAAGATGAGGTTGATACAGCGGCAGTTAGGTCACAGGGTGCAGATAATGCAGATTCCTCTGCTTCCGTCATTAGTGGAAAAGGAGGCAGATTGGCTGATTCTCGGGTGGAGAGTCTGAAAGTTGCTGTCTCAAGTGATGCCTCTGTTGGGGGTTTGGGTGCTCATACTAATACCATAAAATCATCTTTATCTCCTGTTAATGACTCAGCTGAGCTGAAACACAAAGCAAGAGGTGATTTTCAAACAACAGTTGGAGTCAGCAGTGATAGAAGGAATAGTACATTGAAGAATGAAACAGTCAGCAGAAAAGCATTTGCTTTACAGGATAAGCTTTGGTCAATTTATGCAGCTGGTAGTACAGTACCCATTCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTATCGGACAATGTGCTTGGTGGCTTGCAACAAGATTCAACTGGAACTGCTACAGTAGAAGCATTGCAGGAGCTTTTTAGTGGTGATGGACCGTCCAAAAGGGGACGCAGAGGACAAATTGAGATGCCTGTTCCTCCGAGCATCTATCAGAGACTGACATCGAGTTCTACTCTGCTGAATTTGGCACAGGCTCTAGCTTACCACAAGATGTGTTATGAAGATATGCCGCTGCAGGAGCTGCAAGCAACCCAAGAGGAGCAGACCATTCAAAACCTCTGTGACACTCTTCGTACTATTCTTCGCTTGTAG 2547 0.4778 MDQSTFSARTRKARPKSDLYSTVVVHDGDGDDSGGNSYGKRDQSRSGRNARSSVPEDDTYATMVYKDNGHEEDEDDDSSLPPLLKRLPKDFGGGASMDYEDDPDDDAGDFGTMIVKTDRSRERNRSSSPMGSTWNSRKSPLRQASPTTGLGGGDDEDDEGDEGFSTFVVRKTASSSERESVSGTVVRRTSGGAGGGGIVTGSTMERAVASMQASGELGFGKQRRGSGPMQNDEGRQSIGTKVSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLHFHDFVAKCLTKEPRLRPTASEMLKHKFFDKWKTGSMAMMPKIEKARQIRKSMALQAQTLAPAALEDQSNEQKLNDDYGDTVPSRPLNVGVQGAGGLSSDGTLRKLNRLASVELSEGNFGTVVVHEDEVDTAAVRSQGADNADSSASVISGKGGRLADSRVESLKVAVSSDASVGGLGAHTNTIKSSLSPVNDSAELKHKARGDFQTTVGVSSDRRNSTLKNETVSRKAFALQDKLWSIYAAGSTVPIPFLRATDISPIALLSDNVLGGLQQDSTGTATVEALQELFSGDGPSKRGRRGQIEMPVPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQELQATQEEQTIQNLCDTLRTILRL 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2235 848 ProSiteProfiles Protein kinase domain profile. 260 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2235 848 MobiDBLite consensus disorder prediction 39 56 - -
Prci10g2235 848 MobiDBLite consensus disorder prediction 229 253 - -
Prci10g2235 848 MobiDBLite consensus disorder prediction 168 187 - -
Prci10g2235 848 Pfam Protein kinase domain 260 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2235 848 FunFam Aurora kinase A 252 341 - -
Prci10g2235 848 SMART serkin_6 260 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2235 848 MobiDBLite consensus disorder prediction 126 146 - -
Prci10g2235 848 MobiDBLite consensus disorder prediction 109 125 - -
Prci10g2235 848 ProSitePatterns Protein kinases ATP-binding region signature. 266 289 IPR017441 GO:0005524
Prci10g2235 848 CDD STKc_MAP4K3_like 259 514 - -
Prci10g2235 848 MobiDBLite consensus disorder prediction 214 256 - -
Prci10g2235 848 MobiDBLite consensus disorder prediction 1 200 - -
Prci10g2235 848 Gene3D Transferase(Phosphotransferase) domain 1 256 553 - -
Prci10g2235 848 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 243 556 - -
Prci10g2235 848 FunFam serine/threonine-protein kinase dst1 isoform X1 257 548 - -
Prci10g2235 848 SUPERFAMILY Protein kinase-like (PK-like) 257 526 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2235 Prci-Chr10 28453814 28484964 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2235 7 848 MAP Kinase Kinase Kinase Kinase AT1G69220 59.746 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Prci10g2235 Pkinase 1.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2235 - - gmx:100804995 1160.59