Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2196 ATGGCTTCGGACAATGAGAGAGAGACCCACGTTTACCTGGCCAAGCTCTCTGAGCAGGCCGAGCGATACGATGAAATGGTTGAGCATATGAAGACAGTGGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCTGTGGGATATAAAAATGTCATTGGTGCAAGGCGAGCATCCTGGCGTATTATGTCTTCAATTGAGCAGAAAGAAGAGTCTAAGGGAAATGAGAACAATGTTAAACTGATCAAGAGTTACCGCCAAAAGGTTGAGGAGGAACTCTCTAAGATTTGTGGTGACATTCTGACAATTATTGATGAGCATCTTATACCTTCTTCCACATCTGGAGAAGCTACTGTTTTCTACTATAAAATGAAAGGTGACTACTATAGGTATCTTGCTGAGTTCAAGACTGACCAAGCAAGGAAAGAGGCTGCTGAGCAGTCCCTCAAGGGATATGAAGCCGCTTCAGCGACTGCTAACACAGAACTTCCGTCAACACACCCGATCCGCCTTGGTCTTGCGCTTAATTTCTCTGTGTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCATGTCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACATTGAGTGAAGAGTCATACAAGGACAGCACTCTGATCATGCAGTTGTTGAGAGACAACCTGACTCTGTGGACCTCCGATTTGCCAGAGGATGGAGGTGAAGATAATACCAAAAATGAAGAGGCCAAACCAGCTGAACCTGAGAAGAACTAA 783 0.4419 MASDNERETHVYLAKLSEQAERYDEMVEHMKTVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYRQKVEEELSKICGDILTIIDEHLIPSSTSGEATVFYYKMKGDYYRYLAEFKTDQARKEAAEQSLKGYEAASATANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNTKNEEAKPAEPEKN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2196 260 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Prci10g2196 260 MobiDBLite consensus disorder prediction 237 260 - -
Prci10g2196 260 SUPERFAMILY 14-3-3 protein 5 237 IPR036815 -
Prci10g2196 260 Coils Coil 145 165 - -
Prci10g2196 260 Coils Coil 13 33 - -
Prci10g2196 260 Gene3D - 1 248 IPR036815 -
Prci10g2196 260 FunFam 14-3-3 protein epsilon 1 249 - -
Prci10g2196 260 Pfam 14-3-3 protein 13 235 IPR023410 -
Prci10g2196 260 Coils Coil 195 215 - -
Prci10g2196 260 MobiDBLite consensus disorder prediction 241 260 - -
Prci10g2196 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Prci10g2196 260 SMART 1433_4 7 248 IPR023410 -
Prci10g2196 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Prci10g2196 260 PIRSF 14-3-3 1 252 IPR000308 -
Prci10g2196 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Prci10g2196 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Prci10g2196 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Prci10g2196 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Prci10g2196 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Prci10g2196 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2196 Prci-Chr10 28069002 28072240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2196 2 260 14-3-3 family AT1G26480 85.985 1.26e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2196 - K06630 rvl:131311436 459.914