Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2177 ATGGAAGACAAAGACAAAGCAGTATCATCCCGCCCTGCAATATCTCCGACTGAGTTCACCACCGACTCTTCCAGCTGGGCACTCGGTCCCGATGACTCTGACGGCGTCTATTTCTTCTCAGGAGACCGAGACGCCAGCAGTATACTCAGCGAGTTCGGGTGGAATCTCGAACCGGAGGAAACGCACCGGATCGGTGTCGATGGTACGTCTGATGTGGCGGGAGGAGAAGGAGGGGGCGGAGGAGGAGGATTGTGGTTTCCAGATCACTCTGCTCCGGGTGGCTCGACGGAACAAGCTGAGAAAGCGAACACGGTGGCAGCCGATGCGTCCACGTCGAATAATCAATCGGTGTCTTCGAGCTCTAGCGAGGATCCGCCCGAGAAGTCCACCGTATCAGATGAAAAACCGCCGGAGATACCGAGTAAAAGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACTAAGAGTGAGGTTGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGCCAAAAGGCCGTAAAAAATAGTCCATTTCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTGGAGCGATCTTCGGACGATCCCACCATTGTGATAACAACGTACGAAGGCCAACACTGTCATCACACAGTTGGGTTCCCTAGAGCAGGAGTATCAATCATGAGCCATCATGAAGCTGCCGCGGCCTTTGCCGCAGCCGGCCAGTTGGCTCCTACAATGTCACAGTTCTATCATCCGATCCAATTACCAAGAGAAAATGCTAGTACTCTTTCTTCTCGGTCTCAAGCTCCTCTTCCTCCTCATCACCAGCAGCAGCAGCAGGCGCAGGATCATGAACCAGCTGGAGTATCGTCCAGCACTTTAATGTGTCCAGATGATGCAGCCTCGCAGCACCCTCCCATTGATCAAGGACTTCTCGGAGACATTGTGCCGCCAGGAATGCGTAATGGATGA 1002 0.5269 MEDKDKAVSSRPAISPTEFTTDSSSWALGPDDSDGVYFFSGDRDASSILSEFGWNLEPEETHRIGVDGTSDVAGGEGGGGGGGLWFPDHSAPGGSTEQAEKANTVAADASTSNNQSVSSSSSEDPPEKSTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPTIVITTYEGQHCHHTVGFPRAGVSIMSHHEAAAAFAAAGQLAPTMSQFYHPIQLPRENASTLSSRSQAPLPPHHQQQQQAQDHEPAGVSSSTLMCPDDAASQHPPIDQGLLGDIVPPGMRNG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2177 333 MobiDBLite consensus disorder prediction 127 144 - -
Prci10g2177 333 FunFam WRKY transcription factor 57 153 227 - -
Prci10g2177 333 MobiDBLite consensus disorder prediction 55 154 - -
Prci10g2177 333 Pfam WRKY DNA -binding domain 168 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g2177 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 109 285 IPR044810 GO:0003700
Prci10g2177 333 MobiDBLite consensus disorder prediction 1 34 - -
Prci10g2177 333 MobiDBLite consensus disorder prediction 96 126 - -
Prci10g2177 333 SMART WRKY_cls 167 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g2177 333 Gene3D WRKY domain 154 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g2177 333 MobiDBLite consensus disorder prediction 13 28 - -
Prci10g2177 333 SUPERFAMILY WRKY DNA-binding domain 159 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g2177 333 MobiDBLite consensus disorder prediction 269 333 - -
Prci10g2177 333 ProSiteProfiles WRKY domain profile. 162 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g2177 333 MobiDBLite consensus disorder prediction 269 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2177 Prci-Chr10 27866528 27874834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2177 18 332 WRKY Transcription Factor Family AT1G69310 48.615 2.56e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci10g2177 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2177 - - pcin:129321451 620.542