Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2142 ATGATACTGGCCTTGGTACTGTGCATCCTGGTTGCAGGAGCAGGGAATATAGCAGCACGGGAAGAGAGTTGCGATCACATGTGCGGGAACGTGAGCTTCCCCTATCCCTTCGGCACCAGGGATGGCTGCTTTATGAATCCAAAATTCCTCGTTACCTGCAACTCTTCTTCCCCTGAAATTCACATTCCCTATTTAGCAGGCTTTTACCAATTGACGTCCAACATCTCCCTGGATGCTGGCCATGGTGAGATACGCCTCTCTCTTAAAGCTACTCGTAAATGTGAGCATAAAGAAGGATACCTGAGGGCGCCTCTATTATTAGATGAACCGAATACTCCTTTTCTTATATCCAATAGAAAGAACAAATTCACTGTAGTGGGGTGTCGCACCATGGCTTCCATCAAAGATACCGTGGAAAATGGGTATGAAGCTGGGTGCCTGTCCAGATGTCAGAGCGTGAAATACGTGACGAACGGATCCTGTTCAGGTGTAGGCTGTTGCCAGATCACTTTCCCCAAAGCGCTTCAGAATTACACTATCAGTATTAAGCTCACTGAGGGTGACAATATTGAAGATGTGCGAGCATTTAATCCTTGCAGCTACGCATTTTTGGCGGAGGACGGATCCTTCAACTTTTCCGCTCGAGATCTTGGTCCTTGGAGTGATGATGAAAAAAGCTTTCCTGTGGTTTTCAATTGGGCTATTGGCACTGAGAAATGTGCCAGAGCCAAAACGAATACGAGTAGCTATGCATGTGGCACTAACAGTCATTGCCATGACTCAGAAAGTGGAATCGGCTATCTCTGCAAATGTAATGATGGCTTCCAAGGCAACCCCTACCTCTCTCACCCTCATCCACACAGCTGCCGAGATATTGATGAATGCAAGACGCAGAATCCTTGCAGTATGAGATGCCACAATAACGATGGTAACTGCACTTGTTCTTGTCCACCGGGATATAAAGGCGACGGACGCATTCGTGGATCAGGCTGCAAACTCCCTATTGTTGAAATATCATTAGGTATTACTATAGGTTTGCTGTTTGTTTTCATGTTAGTCTCTGCATTTTGTTGGGTGCACAAGAAAAGAGCAATTAAAAAAGTGCGAAGAAAATATTTTGAACAAAATGGAGGAATTATACTACAACAGTTTTTGCAGCAACAAGGTCACCAAGAAAGAACCAAAATATTTACCGAAGCTGAGCTTAAGAGTGCCACAAACAACTTTGATGAAGATAATGGAACCCTTCTTGACCACATAAATCCTTTGAAGAATGGGTTTTCTATTTCATGGGAAACTCGATTACAGGTAGCAGCAGAAACTGCTGAGGCTGTTTCATATCTACACTCTTCTGCTTCCATTCCAATCATTCATCGAGATATTAAATCTACCAACATACTTTTAGATCATAATCTTAGAGCAAAAGTGTCTGACTTTGGAGCTTCAAAACTTGTTCCTCTTGATGAAACTCATATTACCACTGTGGTGCAAGGTACTCTTGGATACTTGGATCCAGAATACCTTTTCATAGGTCAACTGAATGAGAAGAGTGATGTTTATAGCTTTGGAGTTGTTCTTATTGAGCTACTTACTGGAAAAAAAGCAATTGAATTTAGCAAGCCAGAGCAGGAAAACTTAGCCATGCACTTTGTGTCTTCAATGAAAGAAGACCGTTTGTGGGAAATTCTTGATAAAAGAGTACTAGACCAAAAGAATGAAAAGGAACTGAAAGAAGTGGCCTTGTTGGCAAGGAGATGCATAAAAGTAAAAGGCAAGGAAAGGCCGAGCATGAAAGAAGTAGCAAAGGAGCTAGAGGGTCTGATTTCAATGGAAAACCATCCTTTAGAGAACTAG 1854 0.4261 MILALVLCILVAGAGNIAAREESCDHMCGNVSFPYPFGTRDGCFMNPKFLVTCNSSSPEIHIPYLAGFYQLTSNISLDAGHGEIRLSLKATRKCEHKEGYLRAPLLLDEPNTPFLISNRKNKFTVVGCRTMASIKDTVENGYEAGCLSRCQSVKYVTNGSCSGVGCCQITFPKALQNYTISIKLTEGDNIEDVRAFNPCSYAFLAEDGSFNFSARDLGPWSDDEKSFPVVFNWAIGTEKCARAKTNTSSYACGTNSHCHDSESGIGYLCKCNDGFQGNPYLSHPHPHSCRDIDECKTQNPCSMRCHNNDGNCTCSCPPGYKGDGRIRGSGCKLPIVEISLGITIGLLFVFMLVSAFCWVHKKRAIKKVRRKYFEQNGGIILQQFLQQQGHQERTKIFTEAELKSATNNFDEDNGTLLDHINPLKNGFSISWETRLQVAAETAEAVSYLHSSASIPIIHRDIKSTNILLDHNLRAKVSDFGASKLVPLDETHITTVVQGTLGYLDPEYLFIGQLNEKSDVYSFGVVLIELLTGKKAIEFSKPEQENLAMHFVSSMKEDRLWEILDKRVLDQKNEKELKEVALLARRCIKVKGKERPSMKEVAKELEGLISMENHPLEN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2142 617 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 413 607 IPR045274 GO:0007166
Prci10g2142 617 Pfam Protein kinase domain 413 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2142 617 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Prci10g2142 617 Gene3D Laminin 245 293 - -
Prci10g2142 617 FunFam Wall-associated receptor kinase 2 412 617 - -
Prci10g2142 617 SUPERFAMILY Protein kinase-like (PK-like) 412 605 IPR011009 -
Prci10g2142 617 ProSiteProfiles Protein kinase domain profile. 321 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2142 617 CDD EGF_CA 291 323 - -
Prci10g2142 617 SMART egf_5 239 290 IPR000742 -
Prci10g2142 617 SMART egf_5 294 332 IPR000742 -
Prci10g2142 617 SMART egfca_6 291 332 IPR001881 GO:0005509
Prci10g2142 617 SUPERFAMILY EGF/Laminin 291 324 - -
Prci10g2142 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Prci10g2142 617 Pfam Wall-associated receptor kinase galacturonan-binding 24 77 IPR025287 GO:0030247
Prci10g2142 617 Gene3D Laminin 294 333 - -
Prci10g2142 617 SMART serkin_6 332 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2142 Prci-Chr10 26946637 26952188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2142 364 607 Receptor kinase-like Gene Family AT1G21240 53.012 1.77e-73 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci10g2142 Pkinase 5.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2142 - - csin:114265133 435.647