Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2141 ATGATACTGGCCTTGGTACTGTGCATCCTGGTTGCAGGAGCAGGGAATATAGCAGCACGGGAAGAGAGTTGCGATCACATGTGCGGGAACGTGAGCTTCCCCTATCCCTTCGGCACCAGGGATGGCTGCTTTATGAATCCAAAATTCCTCGTTACCTGCAACTCTTCTTCCCCTGAAATTCACATTCCCTATTTAGCAGGCTTTTACCAATTGACGTCCAACATCTCCCTGGATGCTGGCCATGGTGAGATACGCCTCTCTCTTAAAGCTACTCGTAAATGTGAGCATAAAGAAGGATACCTGAGGGCGCCTCTATTATTAGATGAACCGAATACTCCTTTTCTTATATCCAATAGAAAGAACAAATTCACTGTAGTGGGGTGTCGCACCATGGCTTCCATCAAAGATACCGTGGAAAATGGGTATGAAGCTGGGTGCCTGTCCAGATGTCAGAGCGTGAAATACGTGACGAACGGATCCTGTTCAGGTGTAGGCTGTTGCCAGATCACTTTCCCCAAAGCGCTTCAGAATTACACTATCAGTATTAAGCTCACTGAGGGTGACAATATTGAAGATGTGCGAGCATTTAATCCTTGCAGCTACGCATTTTTGGCGGAGGACGGATCCTTCAACTTTTCCGCTCGAGATCTTGGTCCTTGGAGTGATGATGAAAAAAGCTTTCCTGTGGTTTTCAATTGGGCTATTGGCACTGAGAAATGTGCCAGAGCCAAAACGAATACGAGTAGCTATGCATGTGGCACTAACAGTCATTGCCATGACTCAGAAAGTGGAATCGGCTATCTCTGCAAATGTAATGATGGCTTCCAAGGCAACCCCTACCTCTCTCACCCTCATCCACACAGCTGCCGAGATATTGATGAATGCAAGACGCAGAATCCTTGCAGTATGAGATGCCACAATAACGATGGTAACTGCACTTGTTCTTGTCCACCGGGATATAAAGGCGACGGACGCATTCGTGGATCAGGCTGCAAACTCCCTATTGTTGAAATATCATTAGGTATTACTATAGGTTTGCTGTTTGTTTTCATGTTAGTCTCTGCATTTTGTTGGGTGCACAAGAAAAGAGCAATTAAAAAAGTGCGAAGAAAATATTTTGAACAAAATGGAGGAATTATACTACAACAGTTTTTGCAGCAACAAGGTCACCAAGAAAGAACCAAAATATTTACCGAAGCTGAGCTTAAGAGTGCCACAAACAACTTTGATGAAGGTACTCTTGGATACTTGGATCCAGAATACCTTTTCATAGGTCAACTGAATGAGAAGAGTGATGTTTATAGCTTTGGAGTTGTTCTTATTGAGCTACTTACTGGAAAAAAAGCAATTGAATTTAGCAAGCCAGAGCAGGAAAACTTAGCCATGCACTTTGTGTCTTCAATGAAAGAAGACCGTTTGTGGGAAATTCTTGATAAAAGAGTACTAGACCAAAAGAATGAAAAGGAACTGAAAGAAGTGGCCTTGTTGGCAAGGAGATGCATAAAAGTAAAAGGCAAGGAAAGGCCGAGCATGAAAGAAGTAGCAAAGGAGCTAGAGGGTCTGATTTCAATGGAAAACCATCCTTTAGAGAACTAG 1596 0.4342 MILALVLCILVAGAGNIAAREESCDHMCGNVSFPYPFGTRDGCFMNPKFLVTCNSSSPEIHIPYLAGFYQLTSNISLDAGHGEIRLSLKATRKCEHKEGYLRAPLLLDEPNTPFLISNRKNKFTVVGCRTMASIKDTVENGYEAGCLSRCQSVKYVTNGSCSGVGCCQITFPKALQNYTISIKLTEGDNIEDVRAFNPCSYAFLAEDGSFNFSARDLGPWSDDEKSFPVVFNWAIGTEKCARAKTNTSSYACGTNSHCHDSESGIGYLCKCNDGFQGNPYLSHPHPHSCRDIDECKTQNPCSMRCHNNDGNCTCSCPPGYKGDGRIRGSGCKLPIVEISLGITIGLLFVFMLVSAFCWVHKKRAIKKVRRKYFEQNGGIILQQFLQQQGHQERTKIFTEAELKSATNNFDEGTLGYLDPEYLFIGQLNEKSDVYSFGVVLIELLTGKKAIEFSKPEQENLAMHFVSSMKEDRLWEILDKRVLDQKNEKELKEVALLARRCIKVKGKERPSMKEVAKELEGLISMENHPLEN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2141 531 Gene3D Laminin 245 293 - -
Prci10g2141 531 SUPERFAMILY EGF/Laminin 291 324 - -
Prci10g2141 531 Pfam Wall-associated receptor kinase galacturonan-binding 24 77 IPR025287 GO:0030247
Prci10g2141 531 SMART egfca_6 291 332 IPR001881 GO:0005509
Prci10g2141 531 CDD EGF_CA 291 323 - -
Prci10g2141 531 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 411 521 IPR045274 GO:0007166
Prci10g2141 531 SUPERFAMILY Protein kinase-like (PK-like) 410 519 IPR011009 -
Prci10g2141 531 Gene3D Laminin 294 333 - -
Prci10g2141 531 Gene3D Transferase(Phosphotransferase) domain 1 384 529 - -
Prci10g2141 531 Pfam Protein tyrosine and serine/threonine kinase 413 518 IPR001245 GO:0004672|GO:0006468
Prci10g2141 531 SMART egf_5 239 290 IPR000742 -
Prci10g2141 531 SMART egf_5 294 332 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2141 Prci-Chr10 26946637 26952188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2141 411 521 Receptor kinase-like Gene Family AT1G21250 54.464 1.29e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci10g2141 PK_Tyr_Ser-Thr 2.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2141 - - qsa:O6P43_036024 332.028