Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2116 ATGGAAGAGTCAGACAATCCCAATGCTAACAAGTTCATAACCAAAAGAAGCTTCAGAAGAGGAGCCAACCCTCTTGAGCGTCATCACTATCATTATCATCACCATCAGCAACTGCAACAACACCCAACTCAGTTCAGGTTCTGCTACCAGAACGAGTATCAAATTCAGAGGTACTACCCGGCTTTTCTTCCTCTACCTTCTCTTCTACCTCTGCAACTAGCTTTCAAGCCATCCTCGTTCACCCAAAATCAGACCCTCAATTCGAAAACCGATTCACACAAGTCTCCATGCAAGCTGAACAAAAGTTTTTCATTTCAATTCTTCTTATATACCATCTTTTTTCCACATACTAATTCAGCTCCAAAGGAGTCTCATCATCAAGCCAAGGCCTCTTCCGAAGGAGATGATAGGAACAAACTCATGCCTGCAAGAAAACCACAGCCACTAATTGCTGCAAGGAGGCCAGACTCCGGTGGCAAAGAAGGCTCTGCAATCTCTCTCCTTGCTAACCACTTTCTAGTGAAGTTTGATTCATCACAAAAAATATATCATTACAATGTTGAAATTAGTCCCCATCCCTCTAAACAAGTTGCCCGAGTAATCAAAGAGAAGCTTGTTGATAATAATTCTGCTGTGCTCTCTGGTGCTCTTCCGGCATACGATGGGCAGAAGAATCTTTATAGCTCCGTTGAATTCCAAAATGATAAGCTTGAGTTCTACGTGAGCCTGCCAATCCCAGCAAGCAAAAGTTCATTAAATGATAGAGAAATGTGTGAATTGAAAGAGAAGCATGAACAGCATAAACTATTCCGGATAAATATCAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGGGCAAAGAGGAAGATGATGATTGGATTCCACTTCCACAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGATAGTCCAACTGAGAAGTGTATACCAGCAGGTAGGTCTTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGGGGAGGAGCTACTGGGTTGAGAGGGTTCTTTCAGAGTCTTCGACCAACTCAACAAGGACTTGCCCTCAATGTTGATTTTTCTGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCATACTTGCAGAAGCGCCTTGAGTTCCTTCGAGATCTTTCTCAAAGGAAGATGACAAGTTTAACTGGTGAAGAGAGGAAAGAAGTGGAGAAGGCCTTGAAGAACATAAGGGTCTTTGTTTGTCATAGACAAACTGTGCAGAGATATCGTGTCTATGGCTTAACTGAAGAGACTACTGAAAATCTTTGGTTTACTGATAGGGATGGAAAGAATCTGAGGCTCGTTGGCTATTTTAAAGATCACTATACCTATGACATACAATTTAACAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAATTCCTTGGAAAGCTTTCTGATGACCAGACTGCAAAAATACTCAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGTGGCAACCAGGAAAGAGAATTCAACCTCCAGGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGGGATGGAGGTCACATGACAAAGCTAATTCCTTCACGGCATGACCGCCAGTGGAACCTTCTAGACGGTCAAGTCTTTGAGGGAACTAAAATTGAAAGGTGGGCATTGATAGGTTTCGGTGGTACACCTGAGCAGAAGTCCAATATCCCTAGATTTATAAGCCGGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATTGTTAGGCCCCATTTTGAATCAGCCCAGGTGCTTAATAATGTCTCTCTTCTGGAATCTAAGCTTGAGAAAATCCAGAGAACTGCCTCAAACAATCTGCAGCTGCTTATTTGTGTTATGGAGAGAAAACACAAAGGATATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGAGTTATGAGCCAATGCTGCTTGTATCCGAATCTCAGCAAATTAAGCTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGCTGCACAGTTGCTCTGTACAATTCACTGCCATCTCAGATTCCAAGACTCTTTCAATATGATGAACCAGTTATATTTATGGGTGCTGATGTAACTCATCCCCATCCACTTGATGATCACAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCTACTGCAAACAAATATATTTCAAGAATAAGGTCGCAAACGCATCGACATGAAATCATTCATGATCTCGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAAGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAGTTCTATAGAGTTCTTCAAGATGAACTACAATCCATCAAAGGGGCATGTTCTAGATTTGTTGGTTATAAACCATTAGTTACTTTTGTAGTAGTACAGAAAAGGCATCACACAAGATTGTTTCCCTTTGAAACTGATCATCATTGTCACGAGAATATTCCCCCAGGGACTGTGGTTGACTCTGTGATCACTCATCCCAGAGAGTTTGACTTTTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACAAGTTTACTTCTGATGAACTCCAAAAGCTGGTTTATAACCTGTGCTATACTTTTGTTAGATGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTATCTTGACAGATCAGATTATTCATCGACTTTATCCAAAGGTATTTCTTCATTATCTAGACCTGCACCTCCAAAGACAGCACCTCTTCCAAAACTTAATGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3042 0.4162 MEESDNPNANKFITKRSFRRGANPLERHHYHYHHHQQLQQHPTQFRFCYQNEYQIQRYYPAFLPLPSLLPLQLAFKPSSFTQNQTLNSKTDSHKSPCKLNKSFSFQFFLYTIFFPHTNSAPKESHHQAKASSEGDDRNKLMPARKPQPLIAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYNVEISPHPSKQVARVIKEKLVDNNSAVLSGALPAYDGQKNLYSSVEFQNDKLEFYVSLPIPASKSSLNDREMCELKEKHEQHKLFRINIKLVSKINGKELAKYLGKEEDDDWIPLPQDYLHALDVVLRDSPTEKCIPAGRSFYSTSMGRTKEIGGGATGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKMTSLTGEERKEVEKALKNIRVFVCHRQTVQRYRVYGLTEETTENLWFTDRDGKNLRLVGYFKDHYTYDIQFNKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTSGNQEREFNLQVSREMTRLSGRILHPPKLKLGDGGHMTKLIPSRHDRQWNLLDGQVFEGTKIERWALIGFGGTPEQKSNIPRFISRLSQRCEEMGIFLNKNTIVRPHFESAQVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVMSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQYDEPVIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQTHRHEIIHDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFVGYKPLVTFVVVQKRHHTRLFPFETDHHCHENIPPGTVVDSVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENKFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDYSSTLSKGISSLSRPAPPKTAPLPKLNENIKKLMFYC 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2116 1013 Pfam PAZ domain 385 506 IPR003100 GO:0005515
Prci10g2116 1013 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 144 974 - -
Prci10g2116 1013 Pfam Piwi domain 670 969 IPR003165 GO:0003676
Prci10g2116 1013 Pfam Argonaute linker 1 domain 323 371 IPR014811 -
Prci10g2116 1013 SUPERFAMILY PAZ domain 368 526 IPR036085 GO:0005515
Prci10g2116 1013 ProSiteProfiles Piwi domain profile. 669 973 IPR003165 GO:0003676
Prci10g2116 1013 Pfam N-terminal domain of argonaute 164 312 IPR032474 -
Prci10g2116 1013 SMART DUF1785_2 321 373 IPR014811 -
Prci10g2116 1013 FunFam Protein argonaute 7 368 494 - -
Prci10g2116 1013 SMART PAZ_2_a_3 381 521 IPR003100 GO:0005515
Prci10g2116 1013 MobiDBLite consensus disorder prediction 122 142 - -
Prci10g2116 1013 SMART Piwi_a_2 669 973 IPR003165 GO:0003676
Prci10g2116 1013 Gene3D - 741 1013 IPR036397 GO:0003676
Prci10g2116 1013 ProSiteProfiles PAZ domain profile. 381 490 IPR003100 GO:0005515
Prci10g2116 1013 CDD PAZ_argonaute_like 377 489 - -
Prci10g2116 1013 SUPERFAMILY Ribonuclease H-like 654 973 IPR012337 -
Prci10g2116 1013 CDD Piwi_ago-like 538 972 IPR045246 -
Prci10g2116 1013 Gene3D - 555 731 - -
Prci10g2116 1013 Gene3D paz domain 367 494 - -
Prci10g2116 1013 FunFam Argonaute 10 555 731 - -
Prci10g2116 1013 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2116 Prci-Chr10 26228935 26232971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2116 159 1013 Eukaryotic Initiation Factors Gene Family AT1G48410 41.676 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2116 K11593 - gmx:100797755 1596.64