Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2115 ATGGAAGAGTCAGACAATCCCAATGCTAACAAGTTCATAACCAAAAGAAGCTTCAGAAGAGGAGCCAACCCTCTTGAGCGTCATCACTATCATTATCATCACCATCAGCAACTGCAACAACACCCAACTCAGTTCAGGTTCTGCTACCAGAACGAGTATCAAATTCAGAGGTACTACCCGGCTTTTCTTCCTCTACCTTCTCTTCTACCTCTGCAACTAGCTTTCAAGCCATCCTCGTTCACCCAAAATCAGACCCTCAATTCGAAAACCGATTCACACAAGTCTCCATGCAAGCTGAACAAAGTCTCAGTAGACACAGTTTCTCATGCTCCAAAGGAGTCTCATCATCAAGCCAAGGCCTCTTCCGAAGGAGATGATAGGAACAAACTCATGCCTGCAAGAAAACCACAGCCACTAATTGCTGCAAGGAGGCCAGACTCCGGTGGCAAAGAAGGCTCTGCAATCTCTCTCCTTGCTAACCACTTTCTAGTGAAGTTTGATTCATCACAAAAAATATATCATTACAATGTTGAAATTAGTCCCCATCCCTCTAAACAAGTTGCCCGAGTAATCAAAGAGAAGCTTGTTGATAATAATTCTGCTGTGCTCTCTGGTGCTCTTCCGGCATACGATGGGCAGAAGAATCTTTATAGCTCCGTTGAATTCCAAAATGATAAGCTTGAGTTCTACGTGAGCCTGCCAATCCCAGCAAGCAAAAGTTCATTAAATGATAGAGAAATGTGTGAATTGAAAGAGAAGCATGAACAGCATAAACTATTCCGGATAAATATCAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGGGCAAAGAGGAAGATGATGATTGGATTCCACTTCCACAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGATAGTCCAACTGAGAAGTGTATACCAGCAGGTAGGTCTTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGGGGAGGAGCTACTGGGTTGAGAGGGTTCTTTCAGAGTCTTCGACCAACTCAACAAGGACTTGCCCTCAATGTTGATTTTTCTGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCATACTTGCAGAAGCGCCTTGAGTTCCTTCGAGATCTTTCTCAAAGGAAGATGACAAGTTTAACTGGTGAAGAGAGGAAAGAAGTGGAGAAGGCCTTGAAGAACATAAGGGTCTTTGTTTGTCATAGACAAACTGTGCAGAGATATCGTGTCTATGGCTTAACTGAAGAGACTACTGAAAATCTTTGGTTTACTGATAGGGATGGAAAGAATCTGAGGCTCGTTGGCTATTTTAAAGATCACTATACCTATGACATACAATTTAACAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAATTCCTTGGAAAGCTTTCTGATGACCAGACTGCAAAAATACTCAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGTGGCAACCAGGAAAGAGAATTCAACCTCCAGGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGGGATGGAGGTCACATGACAAAGCTAATTCCTTCACGGCATGACCGCCAGTGGAACCTTCTAGACGGTCAAGTCTTTGAGGGAACTAAAATTGAAAGGTGGGCATTGATAGGTTTCGGTGGTACACCTGAGCAGAAGTCCAATATCCCTAGATTTATAAGCCGGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATTGTTAGGCCCCATTTTGAATCAGCCCAGGTGCTTAATAATGTCTCTCTTCTGGAATCTAAGCTTGAGAAAATCCAGAGAACTGCCTCAAACAATCTGCAGCTGCTTATTTGTGTTATGGAGAGAAAACACAAAGGATATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGAGTTATGAGCCAATGCTGCTTGTATCCGAATCTCAGCAAATTAAGCTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGCTGCACAGTTGCTCTGTACAATTCACTGCCATCTCAGATTCCAAGACTCTTTCAATATGATGAACCAGTTATATTTATGGGTGCTGATGTAACTCATCCCCATCCACTTGATGATCACAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCTACTGCAAACAAATATATTTCAAGAATAAGGTCGCAAACGCATCGACATGAAATCATTCATGATCTCGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAAGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAGTTCTATAGAGTTCTTCAAGATGAACTACAATCCATCAAAGGGGCATGTTCTAGATTTGTTGGTTATAAACCATTAGTTACTTTTGTAGTAGTACAGAAAAGGCATCACACAAGATTGTTTCCCTTTGAAACTGATCATCATTGTCACGAGAATATTCCCCCAGGGACTGTGGTTGACTCTGTGATCACTCATCCCAGAGAGTTTGACTTTTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACAAGTTTACTTCTGATGAACTCCAAAAGCTGGTTTATAACCTGTGCTATACTTTTGTTAGATGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTATCTTGACAGATCAGATTATTCATCGACTTTATCCAAAGGTATTTCTTCATTATCTAGACCTGCACCTCCAAAGACAGCACCTCTTCCAAAACTTAATGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3012 0.4193 MEESDNPNANKFITKRSFRRGANPLERHHYHYHHHQQLQQHPTQFRFCYQNEYQIQRYYPAFLPLPSLLPLQLAFKPSSFTQNQTLNSKTDSHKSPCKLNKVSVDTVSHAPKESHHQAKASSEGDDRNKLMPARKPQPLIAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYNVEISPHPSKQVARVIKEKLVDNNSAVLSGALPAYDGQKNLYSSVEFQNDKLEFYVSLPIPASKSSLNDREMCELKEKHEQHKLFRINIKLVSKINGKELAKYLGKEEDDDWIPLPQDYLHALDVVLRDSPTEKCIPAGRSFYSTSMGRTKEIGGGATGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKMTSLTGEERKEVEKALKNIRVFVCHRQTVQRYRVYGLTEETTENLWFTDRDGKNLRLVGYFKDHYTYDIQFNKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTSGNQEREFNLQVSREMTRLSGRILHPPKLKLGDGGHMTKLIPSRHDRQWNLLDGQVFEGTKIERWALIGFGGTPEQKSNIPRFISRLSQRCEEMGIFLNKNTIVRPHFESAQVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVMSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQYDEPVIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQTHRHEIIHDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFVGYKPLVTFVVVQKRHHTRLFPFETDHHCHENIPPGTVVDSVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENKFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDYSSTLSKGISSLSRPAPPKTAPLPKLNENIKKLMFYC 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2115 1003 Gene3D paz domain 357 484 - -
Prci10g2115 1003 Pfam Argonaute linker 1 domain 313 361 IPR014811 -
Prci10g2115 1003 SMART DUF1785_2 311 363 IPR014811 -
Prci10g2115 1003 Pfam Piwi domain 660 959 IPR003165 GO:0003676
Prci10g2115 1003 ProSiteProfiles Piwi domain profile. 659 963 IPR003165 GO:0003676
Prci10g2115 1003 MobiDBLite consensus disorder prediction 105 150 - -
Prci10g2115 1003 SUPERFAMILY PAZ domain 358 516 IPR036085 GO:0005515
Prci10g2115 1003 CDD PAZ_argonaute_like 367 479 - -
Prci10g2115 1003 SMART PAZ_2_a_3 371 511 IPR003100 GO:0005515
Prci10g2115 1003 FunFam Protein argonaute 7 358 484 - -
Prci10g2115 1003 CDD Piwi_ago-like 528 962 IPR045246 -
Prci10g2115 1003 Gene3D - 731 1003 IPR036397 GO:0003676
Prci10g2115 1003 MobiDBLite consensus disorder prediction 108 132 - -
Prci10g2115 1003 Pfam PAZ domain 375 496 IPR003100 GO:0005515
Prci10g2115 1003 SMART Piwi_a_2 659 963 IPR003165 GO:0003676
Prci10g2115 1003 ProSiteProfiles PAZ domain profile. 371 480 IPR003100 GO:0005515
Prci10g2115 1003 Gene3D - 545 721 - -
Prci10g2115 1003 FunFam Argonaute 10 545 721 - -
Prci10g2115 1003 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 133 964 - -
Prci10g2115 1003 SUPERFAMILY Ribonuclease H-like 644 963 IPR012337 -
Prci10g2115 1003 Pfam N-terminal domain of argonaute 154 302 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2115 Prci-Chr10 26228935 26232971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2115 149 1003 Eukaryotic Initiation Factors Gene Family AT1G48410 41.676 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2115 K11593 - gmx:100797755 1593.56