Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2114 ATGGAAGAGTCAGACAATCCCAATGCTAACAAGTTCATAACCAAAAGAAGCTTCAGAAGAGGAGCCAACCCTCTTGAGCGTCATCACTATCATTATCATCACCATCAGCAACTGCAACAACACCCAACTCAGTTCAGGTTCTGCTACCAGAACGAGTATCAAATTCAGAGGTACTACCCGGCTTTTCTTCCTCTACCTTCTCTTCTACCTCTGCAACTAGCTTTCAAGCCATCCTCGTTCACCCAAAATCAGACCCTCAATTCGAAAACCGATTCACACAAGTCTCCATGCAAGCTGAACAAAGTCTCAGTAGACACAGTTTCTCATGCTCCAAAGGAGTCTCATCATCAAGCCAAGGCCTCTTCCGAAGGAGATGATAGGAACAAACTCATGCCTGCAAGAAAACCACAGCCACTAATTGCTGCAAGGAGGCCAGACTCCGGTGGCAAAGAAGGCTCTGCAATCTCTCTCCTTGCTAACCACTTTCTAGTGAAGTTTGATTCATCACAAAAAATATATCATTACAATGTTGAAATTAGTCCCCATCCCTCTAAACAAGTTGCCCGAGTAATCAAAGAGAAGCTTGTTGATAATAATTCTGCTGTGCTCTCTGGTGCTCTTCCGGCATACGATGGGCAGAAGAATCTTTATAGCTCCGTTGAATTCCAAAATGATAAGCTTGAGTTCTACGTGAGCCTGCCAATCCCAGCAAGCAAAAGTTCATTAAATGATAGAGAAATGTGTGAATTGAAAGAGAAGCATGAACAGCATAAACTATTCCGGATAAATATCAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGGGCAAAGAGGAAGATGATGATTGGATTCCACTTCCACAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGATAGTCCAACTGAGAAGTGTATACCAGCAGGTAGGTCTTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGGGGAGGAGCTACTGGGTTGAGAGGGTTCTTTCAGAGTCTTCGACCAACTCAACAAGGACTTGCCCTCAATGTTGATTTTTCTGTAACTGCTTTCCATGAGAGCATAGGAGTGATTCCATACTTGCAGAAGCGCCTTGAGTTCCTTCGAGATCTTTCTCAAAGGAAGATGACAAGTTTAACTGGTGAAGAGAGGAAAGAAGTGGAGAAGGCCTTGAAGAACATAAGGGTCTTTGTTTGTCATAGACAAACTGTGCAGAGATATCGTGTCTATGGCTTAACTGAAGAGACTACTGAAAATCTTTGGTTTACTGATAGGGATGGAAAGAATCTGAGGCTCGTTGGCTATTTTAAAGATCACTATACCTATGACATACAATTTAACAAATTGCCATGCTTGCAGATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAATTCCTTGGAAAGCTTTCTGATGACCAGACTGCAAAAATACTCAAGATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTTGGGCCAACTAGGAATCATTTTGGCAGTGGCAACCAGGAAAGAGAATTCAACCTCCAGGTGTCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTTCACCCTCCCAAGCTAAAGCTTGGGGATGGAGGTCACATGACAAAGCTAATTCCTTCACGGCATGACCGCCAGTGGAACCTTCTAGACGGTCAAGTCTTTGAGGGAACTAAAATTGAAAGGTGGGCATTGATAGGTTTCGGTGGTACACCTGAGCAGAAGTCCAATATCCCTAGATTTATAAGCCGGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATTGTTAGGCCCCATTTTGAATCAGCCCAGGTGCTTAATAATGTCTCTCTTCTGGAATCTAAGCTTGAGAAAATCCAGAGAACTGCCTCAAACAATCTGCAGCTGCTTATTTGTGTTATGGAGAGAAAACACAAAGGATATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGAGTTATGAGCCAATGCTGCTTGTATCCGAATCTCAGCAAATTAAGCTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGCTGCACAGTTGCTCTGTACAATTCACTGCCATCTCAGATTCCAAGACTCTTTCAATATGATGAACCAGTTATATTTATGGGTGCTGATGTAACTCATCCCCATCCACTTGATGATCACAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCTACTGCAAACAAATATATTTCAAGAATAAGGTCGCAAACGCATCGACATGAAATCATTCATGATCTCGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTATCAGGAAGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAGTTCTATAGAGTTCTTCAAGATGAACTACAATCCATCAAAGGGGCATGTTCTAGATTTGTTGGTTATAAACCATTAGTTACTTTTGTAGTAGTACAGAAAAGGCATCACACAAGATTGTTTCCCTTTGAAACTGATCATCATTGTCACGAGAATATTCCCCCAGGGACTGTGGTTGACTCTGTGATCACTCATCCCAGAGAGTTTGACTTTTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACAAGTTTACTTCTGATGAACTCCAAAAGCTGGTTTATAACCTGTGCTATACTTTTGTTAGATGCACCAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTATCTTGACAGATCAGATTATTCATCGACTTTATCCAAAGGTATTTCTTCATTATCTAGACCTGCACCTCCAAAGACAGCACCTCTTCCAAAACTTAATGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3027 0.4192 MEESDNPNANKFITKRSFRRGANPLERHHYHYHHHQQLQQHPTQFRFCYQNEYQIQRYYPAFLPLPSLLPLQLAFKPSSFTQNQTLNSKTDSHKSPCKLNKVSVDTVSHAPKESHHQAKASSEGDDRNKLMPARKPQPLIAARRPDSGGKEGSAISLLANHFLVKFDSSQKIYHYNVEISPHPSKQVARVIKEKLVDNNSAVLSGALPAYDGQKNLYSSVEFQNDKLEFYVSLPIPASKSSLNDREMCELKEKHEQHKLFRINIKLVSKINGKELAKYLGKEEDDDWIPLPQDYLHALDVVLRDSPTEKCIPAGRSFYSTSMGRTKEIGGGATGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKMTSLTGEERKEVEKALKNIRVFVCHRQTVQRYRVYGLTEETTENLWFTDRDGKNLRLVGYFKDHYTYDIQFNKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTRNHFGSGNQEREFNLQVSREMTRLSGRILHPPKLKLGDGGHMTKLIPSRHDRQWNLLDGQVFEGTKIERWALIGFGGTPEQKSNIPRFISRLSQRCEEMGIFLNKNTIVRPHFESAQVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVMSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQYDEPVIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQTHRHEIIHDLGAMVKELLDDFYQEVKKLPGRIIFFRDGVSETQFYRVLQDELQSIKGACSRFVGYKPLVTFVVVQKRHHTRLFPFETDHHCHENIPPGTVVDSVITHPREFDFYLCSHWGMKGTSRPTHYHVLWDENKFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDYSSTLSKGISSLSRPAPPKTAPLPKLNENIKKLMFYC 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2114 1008 Gene3D paz domain 357 484 - -
Prci10g2114 1008 Pfam Argonaute linker 1 domain 313 361 IPR014811 -
Prci10g2114 1008 SMART DUF1785_2 311 363 IPR014811 -
Prci10g2114 1008 CDD Piwi_ago-like 533 967 IPR045246 -
Prci10g2114 1008 Pfam PAZ domain 375 496 IPR003100 GO:0005515
Prci10g2114 1008 SMART Piwi_a_2 664 968 IPR003165 GO:0003676
Prci10g2114 1008 MobiDBLite consensus disorder prediction 105 150 - -
Prci10g2114 1008 ProSiteProfiles Piwi domain profile. 664 968 IPR003165 GO:0003676
Prci10g2114 1008 CDD PAZ_argonaute_like 367 479 - -
Prci10g2114 1008 FunFam Argonaute 10 550 726 - -
Prci10g2114 1008 SMART PAZ_2_a_3 371 511 IPR003100 GO:0005515
Prci10g2114 1008 FunFam Protein argonaute 7 358 484 - -
Prci10g2114 1008 Pfam Piwi domain 665 964 IPR003165 GO:0003676
Prci10g2114 1008 MobiDBLite consensus disorder prediction 108 132 - -
Prci10g2114 1008 Gene3D - 736 1008 IPR036397 GO:0003676
Prci10g2114 1008 ProSiteProfiles PAZ domain profile. 371 480 IPR003100 GO:0005515
Prci10g2114 1008 SUPERFAMILY PAZ domain 358 516 IPR036085 GO:0005515
Prci10g2114 1008 SUPERFAMILY Ribonuclease H-like 649 968 IPR012337 -
Prci10g2114 1008 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 133 969 - -
Prci10g2114 1008 Pfam N-terminal domain of argonaute 154 302 IPR032474 -
Prci10g2114 1008 Gene3D - 550 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2114 Prci-Chr10 26228935 26232971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2114 149 1008 Eukaryotic Initiation Factors Gene Family AT1G48410 41.648 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2114 K11593 - gmx:100797755 1587.39